Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02451 ATGTTTCATATGGACAGCTATCATGCACAATGTGTTGGACTAACAGAAAAAGACGTAGCCATTGAAAACTACCAGTGCCCATATTGTGAAATTCTAAGGAGTGAATTCCGTTATCAGAATGGAGGTGCTCTACTGAGGTTTAAGAAGAAACGCGTTGAACTGAAAGTTCTTACCGAACTCATGTCTGAGGCCGAAAATTTTTGTTTATGGATTGATGAAAGAGATGTTTTGAGTCAACTTGTTGAGAAAGCCCTTCAATGCAAATCTTTCTTGAAAGAAATTTTAATCCTTGCATCAGCTAATGTTGATCAAGATATTTGCATAATCTCTGAAAAATTGGCCACTGCTGCTAGCAACGTGGCTGTTGTCTATGATCAGCACGATACTTGTGATCTTGAGCTGACTTTGGCAAAAACCTTGTGGAAAGCTCAAGTCAATAGAATATTAAATGGTGTACCAAAGCCCACGGTCCAGCGTATTCAGAAGCATCTGAAGGAGGTATCTGCTGGACTGGCTATGGGTATATCACCTGAAGATCACTATATGTTGAAAATTTCAAATGTAAATAGCTTAGTGTTGCAGTGGACAGAACTAGCCAAAAAGGTGGCATCGGATTTTGGGGCACTCGGTCTTGATAAAGTTCTTGAACTTGTAGTGGAAGGTGAAAAGTTGCCCGTTGATGCGAATGAGGAACTAAGCTTGTTAAGGGCACGATGCATGCTTTATTGTATTTGTCGAAAGCCCTTTGATCCAGAAAGGATGATTGCATGTTGTCGTTGTAATGAGTGGTATCACTTCGATTGCATGAAATTGCCATGCACAAGAGAGGTCTACATTTGTCCCGCGTGTAACCCATGTACGGAAGGATTACCTCCAAACCATGACAGATTAACTAGTGGTAAATTTGAGGAGCCAAAGACCCCTTCTCCCAGGCATTCAAACCCTAGAAAGAAACAGAAGAGAGACGCGCCCAGCCTCACTTGCAATACGTTCACTACCAGGGATCAAGATAGTGAACGTTGGTATCCGAGTGGGATAGAATGTCTAAGGTGGCAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTGAACTTCGAATTTCCGGTTCTGCATTGGATTTGAAGACTGGACTTAATAGGATAAAGATGGGCGTGAATTAA 1167 0.4165 MFHMDSYHAQCVGLTEKDVAIENYQCPYCEILRSEFRYQNGGALLRFKKKRVELKVLTELMSEAENFCLWIDERDVLSQLVEKALQCKSFLKEILILASANVDQDICIISEKLATAASNVAVVYDQHDTCDLELTLAKTLWKAQVNRILNGVPKPTVQRIQKHLKEVSAGLAMGISPEDHYMLKISNVNSLVLQWTELAKKVASDFGALGLDKVLELVVEGEKLPVDANEELSLLRARCMLYCICRKPFDPERMIACCRCNEWYHFDCMKLPCTREVYICPACNPCTEGLPPNHDRLTSGKFEEPKTPSPRHSNPRKKQKRDAPSLTCNTFTTRDQDSERWYPSGIECLRWQNRKPFRRAAKKRVELRISGSALDLKTGLNRIKMGVN 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02451 388 MobiDBLite consensus disorder prediction 297 311 - -
Vimu7g02451 388 ProSitePatterns Zinc finger PHD-type signature. 243 283 IPR019786 -
Vimu7g02451 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 285 IPR013083 -
Vimu7g02451 388 SUPERFAMILY FYVE/PHD zinc finger 236 289 IPR011011 -
Vimu7g02451 388 SMART PHD_3 242 284 IPR001965 -
Vimu7g02451 388 SUPERFAMILY FYVE/PHD zinc finger 6 35 IPR011011 -
Vimu7g02451 388 PANTHER CXXC-TYPE ZINC FINGER PROTEIN 1 75 291 IPR037869 GO:0048188
Vimu7g02451 388 MobiDBLite consensus disorder prediction 297 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02451 K11446 - gmx:100819576 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02451 7 20975874 20995166 Vimu7g02451 7 20975874 20995166 ECH
Vimu7g00565 7 5731853 5732526 Vimu7g02451 7 20975874 20995166 PCT