Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu7g02405 | ATGCAACGCATTTTCTGTTTGGTGTCTCTGGTTTCTCTGTTTTCCCTCTTTCTGTCCCGACCCAATGCAGAACCCACAGAAGACAAGCAAGCACTGCTTCATTTAGTTGAAAAGTTGGCTCCTTCAAGACCCCTCAATTGGAACGCAACCTCTTCTCCTTGTACCTCTTGGACCGGTGTAACCTGCAACTCTGACCACTCGCGAGTTATAGCCATTCACTTGCCAGGCTTTGGCTTTCACGGAACCATTCCTCCCAATACGTTAAGCCGTGTTACGTGCTTGCAGACACTCAGTCTCAGATCTAACTCCATAACTGGTCCTCTACCTTCTGATCTCTCCAACCTCTCAGACCTTTCCTTTCTCTACCTTCAGTTCAACAATTTCTCTGGTCCCTTACCGGACTTCTCTGTCTGGAGTAACCTCTCTGTTGTCGACCTCTCCAATAACTGTTTCACCGGCACCATTCCTCTCTCCCTCTCCAATTTGACTCACCTAACTGCCATCAACCTCGCCAACAACTCGCTTTCTGGCCAAATCCCTCTTTCTCTCCACAAGTTTCCAGACTCGGCTTTCGTGGGAAACAATGTCTCTCTCCAGACAGTTTCACATTCCAAATCTGCCAAACACGGTGAAACGGCGCTGTTTTGGGTTGTTATTGCTGCTGCTTCTGTTGCTCTTGCAGCTTTCTTTGTTTTTATCTTTGTGTGCTGGTCCAGAAAGAAGAAAGGAGATTCCTTTACTCGGAAGATGCTGAAGGGAGATATGTCTCCGGAAAAAGTAGTTTCCAGGGACCTTGATGCGAATAATAAGATCTTTTTCTTTGAGGGGTGTAGCTATGCGTTTGACTTGGAGGATTTGTTGAGGGCTTCTGCTGAAGTACTTGGGAAGGGGACGTTTGGTGCTGCATATAAGGCTGCTTTGGAGGATGCTACCACTGTTGTTGTGAAGAGGTTGAAGGAAGTGGCTGTTGGAAAGAGGGACTTTGAGCAGCACATGGAGGTTGTGGGGAATCTCAAACATGAGAATGTGGTTCAGCTAAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAAGGGAGCCTCTCTACTTTGTTGCATGGTAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGAGCATAGAATGAAAATTGCTTTGGGTGCTGCACGAGGCCTTACTCGCATCCATTGCGAGAATGGGGGGAAGCTTGTGCATGGCAACATCAGATCCTCAAATATCTTTGTGAATACTACACAATATGGTTGCATATCTGATCTTGGCCTGGCAACCATCATGAGTTCAGTTGCCATACCCATCTCACGAGCCGCTGGTTACAGAGCACCAGAAGTCACGGACACTAGAAAAGCAACGCAACCTGCTGATGTTTACAGTTTTGGTGTGGTGTTGCTGGAGATTCTCACTGGGAAATCCCCTGTATACACCACTGGTGGCGACGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTCAGAGAGGAGTGGACAGCAGAAGTGTTCGACTTGGAGCTGATCAGATATCCCAACATAGAGGAAGAGATGGTTGAAATGTTACAGATAGCCATGTCTTGCGTGGTGAGGGTTCCTGATCAGAGGCCTAAGATGTCGGAAATTGTAAAAATGATAGAAAATGTGAGGCAGATTGATATAGCCATCATGACTCAGCAACCATCATCTGAGAACTAA | 1728 | 0.4659 | MQRIFCLVSLVSLFSLFLSRPNAEPTEDKQALLHLVEKLAPSRPLNWNATSSPCTSWTGVTCNSDHSRVIAIHLPGFGFHGTIPPNTLSRVTCLQTLSLRSNSITGPLPSDLSNLSDLSFLYLQFNNFSGPLPDFSVWSNLSVVDLSNNCFTGTIPLSLSNLTHLTAINLANNSLSGQIPLSLHKFPDSAFVGNNVSLQTVSHSKSAKHGETALFWVVIAAASVALAAFFVFIFVCWSRKKKGDSFTRKMLKGDMSPEKVVSRDLDANNKIFFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAVGKRDFEQHMEVVGNLKHENVVQLKGYYYSKDEKLMVYDYYTQGSLSTLLHGKRGEDRVPLDWEHRMKIALGAARGLTRIHCENGGKLVHGNIRSSNIFVNTTQYGCISDLGLATIMSSVAIPISRAAGYRAPEVTDTRKATQPADVYSFGVVLLEILTGKSPVYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVVRVPDQRPKMSEIVKMIENVRQIDIAIMTQQPSSEN | 575 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu7g02405 | 575 | Pfam | Protein tyrosine and serine/threonine kinase | 292 | 555 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu7g02405 | 575 | Gene3D | Ribonuclease Inhibitor | 25 | 207 | IPR032675 | - | |
Vimu7g02405 | 575 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 363 | 570 | - | - | |
Vimu7g02405 | 575 | SUPERFAMILY | Protein kinase-like (PK-like) | 292 | 556 | IPR011009 | - | |
Vimu7g02405 | 575 | ProSiteProfiles | Protein kinase domain profile. | 288 | 559 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu7g02405 | 575 | FunFam | pollen receptor-like kinase 1 | 257 | 362 | - | - | |
Vimu7g02405 | 575 | Pfam | Leucine rich repeat N-terminal domain | 26 | 63 | IPR013210 | - | |
Vimu7g02405 | 575 | Gene3D | Phosphorylase Kinase; domain 1 | 257 | 362 | - | - | |
Vimu7g02405 | 575 | PANTHER | OS05G0588300 PROTEIN | 4 | 571 | - | - | |
Vimu7g02405 | 575 | SUPERFAMILY | L domain-like | 40 | 189 | - | - | |
Vimu7g02405 | 575 | Gene3D | Transferase(Phosphotransferase) domain 1 | 364 | 572 | - | - | |
Vimu7g02405 | 575 | ProSitePatterns | Protein kinases ATP-binding region signature. | 294 | 325 | IPR017441 | GO:0005524 | |
Vimu7g02405 | 575 | FunFam | Probable inactive receptor kinase RLK902 | 25 | 184 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu7g02405 | Vimu-Chr7 | 20616530 | 20618881 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu7g02405 | 22 | 575 | Receptor kinase-like Gene Family | AT4G23740 | 60.331 | 0.0 | 717 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Vimu7g02405 | PK_Tyr_Ser-Thr | 1.2e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu7g02405 | - | - | vun:114171626 | 1043.11 |