Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02401 ATGGAACAGTTCCGGCATATCGGAGAGGTGGTTGGGAGTCTGAAAGCGCTTATGGTTCTGCGCGATGAAATCCAAATCAACCAACGGCAATGCTGTTTGATCCTGGACATATTCAGTTTGGCGATGGACACGATCGCTGAGGAGATGCGGCAGAACCTGAAGCTGGAAGAGAGGAACAGCAAATGGAAGGCTCTGGAATCTCCTCTGACAGAGTTGTGCAGGGTTTTCAAGGAGGGAGAGGATTACATAAAGCAGTGTTTGGATTCCAAACATTGGTTGGGGAAAGCCATCACCCTCTCTCATCACCGAGACTGCGTGGAATTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAGATTGCAGGGGAGAATACGGGTTTAGATCCGGAGGAGAAGGCAAAGAAGAAGGTGATACTGGGTCGGAAGTATGACGTGGAATGGAAGGACCCGGAGCTGTTCCAATGGAGGTTCGGGAAGCAGTACCTGGTCCCGCGCGGGATTTGCAAGAAGTTGGAGAACGCCTGGAGAGAGGACAGGTGGAGGCTCATCGAGGCCATCAAGGACAAGACTGCGAAGGAAGGTGGTTCAGCTGTGTTTAGGGAGAGCGAGCATGGCCTCGCTGTTATGCTCCTCAAAAAGCTTCTCAATGGGTCGGAGATCGGCCCAATTGCGGTGCTTGTTGGGTCCACAGATTTCCAGGTGAGACGGAGGTTGGGCCACCGGAAGGACTTCAAGGAAATCCAATGGTTGGGGCAAAGTTTCGCGATGAGGAACTTTGAAGGGGAGAGAGAAGCACACCAGACTGAGGTCTCCTCTATTCTCTCGCTTTCACACCCCAACATATTGCAATACCTTTTCGGGTTTTACGACGAGGAGAAGAAAGAGTTCTCTCTTGTGATGGAGTTAATGAACAAGGATCTGTGGACTTACATGAAAGAGAATTGTGGTCCAAGGGGGCAGATTCTATTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGCATAGAGTACCTGCATTCCCAAAACATTTGCCATGGACACCTTAACCCTTGTAATATTTACCTCAAGAAAATGAACTCCCAAGAGGATTATTTTCAGGCAAAGGTTGCAGGCTTTGCCTTGTCTTCTATCAACAATGCTAGTACTGACGATACTGCCATCCAAGACTTTAACCCTTTAACCTGGTATGCTCCTGAAGTTCTGTCCCGGTTGGAACAAAAGAATGGTGGTGCTTCTTCTTCTAAGGAAGCCGATGCCTACAGCTTTGGGATGATATGCTTCCAGTTGTTGACAGGAAAAGTGCCTTTTGAAGATAACCACCTTCAAGGAGACAGAATTAGACAAAACATAAAGGTCGGTGAGAGACCTTTGTTTCCTTACCGTTCCCCGAAATACCTTGTGAATTTGATCAAGAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCTAGCTTCTCGTCCATATGTAGGATTTTGCGGTACACCAAAAAGTTCCTTGCCATGAATTCAGAGTCCCAAATCATCAACCCTGAGCTCAACTTTCTTGAGGTTCCACCTGTGGATTGCTTTGAGATAGAGACAACGTTCCTAAAGAGCTCTTCAACCGAGAGGTCATCTTGTGTGTCCGCTGTGTCCCAGATACCCTATGAAATGTTTGCTTATAAGGTTGTGGAGAAAGAGAAAATGAATCCTAACAACAGTACTACCAAAGATGAGTGCTGCGAGCACCACCAAAAGGATGGGTGTAGGAGTGAAAGTGATGACCCTAGTGCAGAGTGCGATGGTGATAACACCTCCATAGTGACAGATTCGCTCCCTCAAACAACCCATCCTACATCAATTTGCAGTGACGCAAAGTTTGTTTCCTCTGAAGTCCCCTACAAGAAAACGGTTAGAATAAAGAACCAAACACATGTGAAGGCAAAGAAAGAACAAGAAAAACAAATATTGCGGGCGACAAAATCATTTCGACCGTCTTTATCGAGTCGAGTTTCAAGGACGAGAAATGTGAATACATCCTCATTGCCACCAAGCAATTTGAGTCCAAGCAGATCTTTCCTGGGGTCTCAATCACCAGCATCACCATCACTACCCATTCCTTCAAGGAAAAAACACGATGGCAATTTGTCGGATACTAAGACCAGTGTAAGGTTGAAAAAAATGGATCAGTCAACATTACCTAGATATGGGAGCATGGCAGATAGTTCAAGGATGAAGAAGTCACAAATGACGTTGAACCAATCTTTGAGCGTGGGAAGAATGAGACGTGCCAACACTGAGACCGATTTGAAGGGGCTCACGCGAACCAATCTACTGAGCACTCCAAGAGCATCCACAAGGAGCAGAAAAGATGGTAATGTCTCAGTTTCGGACAGCGGTTCAAGGATGCCAACAGGTGGGTTTTCGCCGTGGGCATTGAGTCCCCAAAGCCCCCATTTAAGAACAAATAAAGCAACCTTTCATCTCTCTGACTATGAAAACAGTTTTGTGAAGAAAAGAGGAAGCATGTCACCGTTCGCAACTTGTGGCCATGTCTCGGATTAA 2571 0.4702 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMDTIAEEMRQNLKLEERNSKWKALESPLTELCRVFKEGEDYIKQCLDSKHWLGKAITLSHHRDCVEFHIHNLLCYFPAVIEAIEIAGENTGLDPEEKAKKKVILGRKYDVEWKDPELFQWRFGKQYLVPRGICKKLENAWREDRWRLIEAIKDKTAKEGGSAVFRESEHGLAVMLLKKLLNGSEIGPIAVLVGSTDFQVRRRLGHRKDFKEIQWLGQSFAMRNFEGEREAHQTEVSSILSLSHPNILQYLFGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRGQILFSIPVVVDLMLQMARGIEYLHSQNICHGHLNPCNIYLKKMNSQEDYFQAKVAGFALSSINNASTDDTAIQDFNPLTWYAPEVLSRLEQKNGGASSSKEADAYSFGMICFQLLTGKVPFEDNHLQGDRIRQNIKVGERPLFPYRSPKYLVNLIKKCWQTDPAQRPSFSSICRILRYTKKFLAMNSESQIINPELNFLEVPPVDCFEIETTFLKSSSTERSSCVSAVSQIPYEMFAYKVVEKEKMNPNNSTTKDECCEHHQKDGCRSESDDPSAECDGDNTSIVTDSLPQTTHPTSICSDAKFVSSEVPYKKTVRIKNQTHVKAKKEQEKQILRATKSFRPSLSSRVSRTRNVNTSSLPPSNLSPSRSFLGSQSPASPSLPIPSRKKHDGNLSDTKTSVRLKKMDQSTLPRYGSMADSSRMKKSQMTLNQSLSVGRMRRANTETDLKGLTRTNLLSTPRASTRSRKDGNVSVSDSGSRMPTGGFSPWALSPQSPHLRTNKATFHLSDYENSFVKKRGSMSPFATCGHVSD 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02401 856 MobiDBLite consensus disorder prediction 602 617 - -
Vimu7g02401 856 Pfam Protein of unknown function (DUF1221) 21 235 IPR010632 -
Vimu7g02401 856 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 254 502 - -
Vimu7g02401 856 SUPERFAMILY Protein kinase-like (PK-like) 264 524 IPR011009 -
Vimu7g02401 856 MobiDBLite consensus disorder prediction 713 727 - -
Vimu7g02401 856 FunFam Kinase family protein 235 514 - -
Vimu7g02401 856 MobiDBLite consensus disorder prediction 573 617 - -
Vimu7g02401 856 MobiDBLite consensus disorder prediction 661 706 - -
Vimu7g02401 856 ProSiteProfiles Protein kinase domain profile. 227 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02401 856 MobiDBLite consensus disorder prediction 646 660 - -
Vimu7g02401 856 Gene3D Transferase(Phosphotransferase) domain 1 242 522 - -
Vimu7g02401 856 Pfam Protein tyrosine and serine/threonine kinase 268 500 IPR001245 GO:0004672|GO:0006468
Vimu7g02401 856 MobiDBLite consensus disorder prediction 573 599 - -
Vimu7g02401 856 MobiDBLite consensus disorder prediction 779 819 - -
Vimu7g02401 856 MobiDBLite consensus disorder prediction 645 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02401 Vimu-Chr7 20590585 20593466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02401 275 501 MAP Kinase Kinase Kinase AT5G58950 28.017 1.56e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vimu7g02401 PK_Tyr_Ser-Thr 4.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02401 - - vum:124844837 1598.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02401 7 20590585 20593466 Vimu7g02401 7 20590585 20593466 ECH