Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02390 ATGAGTAGTGAAATGGATTCCAGAGATAGCAGTGCGAAAACAAAATCTAAAGAAATTGAACTATCTTACGGTGCCTATCCCAAGAAGAGAAAGCGTCATTCCCAAGTACCGGTGGTTATTCCCGCCATGGAAGAACCCAAGGCCTCCTCCTCTTCCGCAACACACGGTTCCATATCCGTGATCGGGCGGCGACGCGCAATGGAGGACGCCGTCATGGTGGTTCCCGGCTTGGTGGCGGCGGGGCAGTGGTGTGGCGGTTATGATTTCTTCGCGGTTTACGACGGACACGGCGGGACGTTGGTGGCGAACGCTTGCCGCGACAGGTTGCACCTGCTGTTGGCGGATGAAGTGAGGGAGAACGCGAAGAAGGGATTGGATTGGTACGAGGTGATGTGTTCGTGTTTCACGAAGATGGACAAGGAGATCGGAGTTGGTGGTAAGGCGCGCGACGACGGTAGCGGAAACACCACAGGTTCAACGGCGGCGGTGGTTGTCGTTGGGAAGAAGGAGATTGTGGTGGCGAATTGCGGTGACTCGAGGGCGGTGTTGTGCCGTGGCGGTGTAGCCATACCACTTTCGCGTGATCATAAGCCTGATCGTTCAGATGAAAGAGAGAGAATAGAAGCTGCCGGTGGAAGAGTGATTAATTGGAACGGAAGTCGTGTTTTGGGAGTTCTTGCTACTTCCAGATCCATAGGGGATCATTCGATGAAACCTTTTGTGATATCTGAGCCAGAGACGATGGTGTACGAGCGAACAGAGTGTGATGAGTTTGTGGTGGTAGCAAGCGATGGGTTATGGGATGTGGTGTCTAACAAGTTTGTTTGTGAGGTTGTACGAAGCTGCCTCCATGGCCAAATCAAGAGGAATTTAAAAGAGGAGACTGTTGTAAGCAATGCTACAGAAGCTGCATCTTTGTTGGCAGAGTTGGCCATGGCTCGTGGAAGCAAAGACAATATCAGTGTCATAGTCATCCAACTCAACAACACCACTTCATCCTGA 1002 0.516 MSSEMDSRDSSAKTKSKEIELSYGAYPKKRKRHSQVPVVIPAMEEPKASSSSATHGSISVIGRRRAMEDAVMVVPGLVAAGQWCGGYDFFAVYDGHGGTLVANACRDRLHLLLADEVRENAKKGLDWYEVMCSCFTKMDKEIGVGGKARDDGSGNTTGSTAAVVVVGKKEIVVANCGDSRAVLCRGGVAIPLSRDHKPDRSDERERIEAAGGRVINWNGSRVLGVLATSRSIGDHSMKPFVISEPETMVYERTECDEFVVVASDGLWDVVSNKFVCEVVRSCLHGQIKRNLKEETVVSNATEAASLLAELAMARGSKDNISVIVIQLNNTTSS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02390 333 ProSiteProfiles PPM-type phosphatase domain profile. 54 327 IPR001932 -
Vimu7g02390 333 SUPERFAMILY PP2C-like 51 329 IPR036457 -
Vimu7g02390 333 CDD PP2Cc 55 327 IPR001932 -
Vimu7g02390 333 MobiDBLite consensus disorder prediction 1 33 - -
Vimu7g02390 333 SMART PP2C_4 44 325 IPR001932 -
Vimu7g02390 333 FunFam Protein phosphatase 2C 51 47 333 - -
Vimu7g02390 333 MobiDBLite consensus disorder prediction 1 27 - -
Vimu7g02390 333 Pfam Protein phosphatase 2C 57 320 IPR001932 -
Vimu7g02390 333 Gene3D - 48 332 IPR036457 -
Vimu7g02390 333 ProSitePatterns PPM-type phosphatase domain signature. 89 97 IPR000222 GO:0043169
Vimu7g02390 333 PANTHER PROTEIN PHOSPHATASE 38 326 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02390 Vimu-Chr7 20516209 20517597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02390 51 327 PP2C-type Phosphatase Gene Family AT2G29380 48.611 1.08e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02390 K14497 - gmx:100813248 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02390 7 20516209 20517597 Vimu7g02390 7 20516209 20517597 ECH