Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02374 ACTGAGGAGGCAGAAAAGTTGGATATCCCATTCCAGTTCAACCCTGTTGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTGGCAATCAGTTCCATTCTGCAGTTACACTCCCTTTTGGCCTTGGATGACGATGCCTCCAGGAGAAGATCTCCTCTTCCATCAAACAATTCAAACGCAATTCAACTGCAGAAAATCCTGCAGATGAATCCAAACACACGCTGTGATTTGGTTGAAAAGGACATGGTTCACGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCCTCGGCTTCAGCCTCATCCTCGCCTGGGTCTTCATCTGCACCAATGAAATCCGAGAGCTTTCTGAATGCCCTGTGGGGGATATCACCAAAGATCATGGTTGTAACGGAGCAAGACTTCAACCACAACAGTTCAAACCTGATGGATAGGCTGCTAGAATCTCTAAATTCTTATGCTGCATTGTTTGATTGTTTGGAATGCACTGTCTCCAGAGCATCCTTGGATAGAATGAAGATCGAGAAGATGCTTCTGGGGGAGGAAATCAAGAACATTGTAGCCTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGACTCGATTCATCTGGTTTTGCAAACGTGCCTTTAAGCCGTCAGGGTGTGACGCAGGCAATGAGGTTCTTGGAGAACTATGGTTGTAATGGATATAGAATGAGGGAGGAAAATGGCTGTGTGATCATTTACTGGCAGGATCGAACCTTGTTTTCTGTGACAGCTTGGAGATCAAGAAGGTAA 822 0.4562 TEEAEKLDIPFQFNPVVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDDDASRRRSPLPSNNSNAIQLQKILQMNPNTRCDLVEKDMVHGYSPSPDSASASASASSSPGSSSAPMKSESFLNALWGISPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRASLDRMKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDSSGFANVPLSRQGVTQAMRFLENYGCNGYRMREENGCVIIYWQDRTLFSVTAWRSRR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02374 273 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 266 IPR005202 -
Vimu7g02374 273 MobiDBLite consensus disorder prediction 94 117 - -
Vimu7g02374 273 MobiDBLite consensus disorder prediction 97 117 - -
Vimu7g02374 273 ProSiteProfiles GRAS family profile. 1 270 IPR005202 -
Vimu7g02374 273 Pfam GRAS domain family 2 270 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02374 Vimu-Chr7 20389966 20391406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02374 2 273 GRAS Transcription Factor Family AT1G50420 58.909 8.79e-110 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu7g02374 GRAS 2.7e-71 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02374 - - vun:114174232 430.639