Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02316 ATGAAGTACATAGGTCTTCAGAAACTTATAGAACGAAATGAGCAATTATATAGCTCCGGGAATGCTCCCAATGGAGGTGTATCTTTACCCTTCATTCTGGTGCAGACACGCCCCCATGCAACTGTTGAAGTGGAAATATCAGAAGATATGCAGCTTGTGCATTTTGATTTCAATAGCACTCCCTTTGAGCTGCATGATGATAACTATGTTCTCAAGGCAATGAAATTTTGTGAGAGATCTCAGAATGACAACAAACCAGACAATCCTCCAGATGGCGGGGAAGGTTCTAGCATGTCTAGTTTGTATCATGCACAGATTCCTAGTTCAGTTTCAAACCCTCCTGCGAGACCTCCTTCATCCCCACCACTCCCTGGAATATTGAAGGCAAGAGTTAAGAACGAGCATTGA 408 0.4314 MKYIGLQKLIERNEQLYSSGNAPNGGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERSQNDNKPDNPPDGGEGSSMSSLYHAQIPSSVSNPPARPPSSPPLPGILKARVKNEH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02316 135 CDD DP_DD 1 74 IPR014889 -
Vimu7g02316 135 PANTHER TRANSCRIPTION FACTOR DP 2 116 IPR015648 GO:0005667|GO:0051726
Vimu7g02316 135 Gene3D Transcription factor DP 1 90 IPR038168 -
Vimu7g02316 135 SMART DP_2 1 133 IPR014889 -
Vimu7g02316 135 MobiDBLite consensus disorder prediction 80 135 - -
Vimu7g02316 135 SUPERFAMILY E2F-DP heterodimerization region 2 87 IPR037241 -
Vimu7g02316 135 FunFam Transcription factor-like protein DPB 1 96 - -
Vimu7g02316 135 Pfam Transcription factor DP 1 104 IPR014889 -
Vimu7g02316 135 MobiDBLite consensus disorder prediction 93 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02316 Vimu-Chr7 19986309 19987707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02316 2 82 E2F-DP Transcription Factor Family AT5G02470 54.321 1.36e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02316 K04683 - gmx:100797603 224.942