Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02301 GGGGGTGGAGGAGATGCAACTGGGGTGATGAGAGGTCCCAATGAAGAAGATGATGCTGTTGGAAAGAATGAAGATGAAAAGTGGCCACCTTGGCTTAGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAAACTGAGTGTAACATGTATTGTTTGGACTGTAACAATGGAGCCCTTTGCTCTGTCTGTCTTGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATTCAAAAATTTGTGGACATAACAGGTGTTCAAAATTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACCAACACCTGCAAAGTATGTGACCGCAGCCTTCTTGATTCATTCAGCTTCTGTTCTCTTGGTTGTAAGATGGTTGGAACCTCCAACAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGGGTCTGATGGCGAAGAATCAATCAATGGCATGAGCAATGAAAGTGCAAGAATCAAAATCCAGAGCTTCACACCATCAACACCACCACCAACAGTGGTAAATCACAGAACTGCTAAGAGGAGAAAGGGTGTCCCACATAGATCTCCAATGGGAGGTACCCTTATTACAGAATACTACAAATGGTAG 702 0.4373 GGGGDATGVMRGPNEEDDAVGKNEDEKWPPWLRPLLQTSFFVQCKVHADSHKTECNMYCLDCNNGALCSVCLASHREHRAIQIRRSSYHDVIRVSEIQKFVDITGVQNYIINSAKIVFLNERPQPRPGKGVTNTCKVCDRSLLDSFSFCSLGCKMVGTSNKFRKKKMLAETDGSDGEESINGMSNESARIKIQSFTPSTPPPTVVNHRTAKRRKGVPHRSPMGGTLITEYYKW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02301 233 CDD Bbox2 44 83 - -
Vimu7g02301 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 22 222 - -
Vimu7g02301 233 Pfam PLATZ transcription factor 84 155 IPR006734 -
Vimu7g02301 233 MobiDBLite consensus disorder prediction 1 26 - -
Vimu7g02301 233 MobiDBLite consensus disorder prediction 195 221 - -
Vimu7g02301 233 MobiDBLite consensus disorder prediction 11 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02301 Vimu-Chr7 19875152 19876654 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu7g02301 PLATZ 2.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02301 - - vun:114172978 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02680 5 36694970 36697607 Vimu7g02301 7 19875152 19876654 ECH
Vimu7g02301 7 19875152 19876654 Vimu7g02301 7 19875152 19876654 ECH