Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02276 ATGGATTCAGAAAGCGAGGCTGTCAAGACACCAAAGAGGGAATTGGAGGCAGAAGGGGCTCTGAATTCAAAGATGAAGGGTGCTGGAAACATAAGCAGTAAGGATATGATATTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCCCAGCTGGAAAAGCACTTGAGCAGGGTTTGGTCAAGGAGCACCACTGAGGCAAAACGGCCCAAAGAAGACTGGGAGGTCGATTTGGCCAAATTGGATCTACGATATGTTGTGGCTCAGGGAGCCTATGGTACTGTATACAGGGGCACCTATGATTCTCAAGACGTTGCTGTGAAAGTATTGGACTGGGGTGAGGATGGTGTAGCTACCCCAGCTGAAGCTGCTGCTTTACGGGCATCTTTTAGACAGGAGGTTGCTGTCTGGCACAAACTTGACCATCCTAATGTGACAAAATTTGTTGGAGCTTCGATGGGCACTTCAAATCTCAAGATTCCCTCAAAAAATTCGAATGGAGAGGAAGAGACTCTTCCTTCTAGGGCATGCTGTGTCATTGTGGAGTTTATCTCTGGTGGGACACTGAAGCAATACTTGATCAAAAATAGGAGGAAGAAACTAGCTTACAAGGTTGTGGTTCAGCTGGCTTTGGACCTTGCAAGAGGGTATGTCCTATTTGAGCATCTCGACAATGTTAAATCAGAGAATATGTTACTAAGTCCTAGTCGTAATCTGAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTATGAATCCAAGCGACATGACAGGTGAAACTGGAACCCTTGGATACATGGCCCCAGAGGTTCTGGACGGGAAGCCTTACAACAGGAGATGCGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGTGATATGCCTTATCCAGATCTAAGTTTTGCTGATGTGTCATCTGCAGTTGTTCGGCAAAATTTACGACCAGACATACCAAGATGTTGTCCAAGCGCCTTATCAAACATCATGCGGAGATGTTGGGATGCAAATCCGAACAAGCGGCCAGAAATGGACGAGGTGGTGAGAATGCTGGAAGCACTTGATACCAGCAAAGGTGGTGGAATGATACCAGAAGATCAGAATTCAGGGTGCTTCTGTTTTGCTCCAACCCGTGGCCCCTGA 1152 0.4618 MDSESEAVKTPKRELEAEGALNSKMKGAGNISSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSTTEAKRPKEDWEVDLAKLDLRYVVAQGAYGTVYRGTYDSQDVAVKVLDWGEDGVATPAEAAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKNSNGEEETLPSRACCVIVEFISGGTLKQYLIKNRRKKLAYKVVVQLALDLARGYVLFEHLDNVKSENMLLSPSRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPRCCPSALSNIMRRCWDANPNKRPEMDEVVRMLEALDTSKGGGMIPEDQNSGCFCFAPTRGP 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02276 383 MobiDBLite consensus disorder prediction 1 20 - -
Vimu7g02276 383 ProSiteProfiles Protein kinase domain profile. 81 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02276 383 SUPERFAMILY Protein kinase-like (PK-like) 62 355 IPR011009 -
Vimu7g02276 383 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 357 - -
Vimu7g02276 383 MobiDBLite consensus disorder prediction 1 28 - -
Vimu7g02276 383 FunFam Kinase suppressor of Ras 1 70 165 - -
Vimu7g02276 383 Pfam Protein tyrosine and serine/threonine kinase 84 354 IPR001245 GO:0004672|GO:0006468
Vimu7g02276 383 Gene3D Phosphorylase Kinase; domain 1 70 163 - -
Vimu7g02276 383 CDD STKc_MAP3K-like 87 354 - -
Vimu7g02276 383 Gene3D Transferase(Phosphotransferase) domain 1 186 369 - -
Vimu7g02276 383 PRINTS Tyrosine kinase catalytic domain signature 181 194 IPR001245 GO:0004672|GO:0006468
Vimu7g02276 383 PRINTS Tyrosine kinase catalytic domain signature 281 303 IPR001245 GO:0004672|GO:0006468
Vimu7g02276 383 PRINTS Tyrosine kinase catalytic domain signature 325 347 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02276 Vimu-Chr7 19784035 19786231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02276 1 383 MAP Kinase Kinase Kinase AT3G22750 74.677 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vimu7g02276 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02276 - - gmx:100803917 686.411