Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02272 ATGGAACTCGGGTATGTTATTGGTTCGAAATACTGGGGTAAAGGGGTTGCCACGGTGGTTGTGAAAGAAGTGGTTAAGGTTGCTTTCAGTGAGCAATCGTTGCCAAACTTGGAGAGAATTGAAGCTCTTGTTGATGTGCTGAATGTTGGGTCTCAGAGAGTGCTGGAAAAAGCTGGTTTTCAGAGGGAGGGAATTCTGAGGAAATATTGTAAAATTCAGAACCCAATGGAGAAATCAGAAGAAAAAGAAGAAAGTGTCGATTTGAGTCGAATATCTCTTCGACCACTTGAGCTCTCTGACCTGGATGATGTCTTGGTGTGGACCTCCGATGAAAAGGTGGCAACTTTCTGCACTTGGGATCCTTATAGTAGCAAAGAAGAGGGCATCAATTTCATCCAAAACATAGCAAGCAAGTTGGCGTGGTGCAGAGCAATATGCCTGAACGACCGTGCTATTGGGTGTGTTTCTCTTTCCTCAAAATCAGAGCACGATCAAAGCAGATCCTTGGAACTTGGCTATGTTATTGGTTCGAAATACTGGGGTAAAGGGGTTGCCACGGTGGTTGTGAAAGAAGTGGTTGAGGTTGCTTTCACTGAGCAATTGTTGCCAAACTTGGAGAGGATTGAAGCTCTTGTTGATGTGCTGAATGTTGGGTCTCAGAGAGTGCTGGAAAAAGCTGGTTTTCAGAGGGAGGGAATTCTTAGGAAGTATGTGTTCCTCAAAGGAAAAGCCAGAGATATGGTGATGTTCAGTGTTCTCTCTACTGATCCCCACCTTTCATCTACTTAA 789 0.4436 MELGYVIGSKYWGKGVATVVVKEVVKVAFSEQSLPNLERIEALVDVLNVGSQRVLEKAGFQREGILRKYCKIQNPMEKSEEKEESVDLSRISLRPLELSDLDDVLVWTSDEKVATFCTWDPYSSKEEGINFIQNIASKLAWCRAICLNDRAIGCVSLSSKSEHDQSRSLELGYVIGSKYWGKGVATVVVKEVVEVAFTEQLLPNLERIEALVDVLNVGSQRVLEKAGFQREGILRKYVFLKGKARDMVMFSVLSTDPHLSST 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02272 262 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 90 253 IPR016181 -
Vimu7g02272 262 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 74 - -
Vimu7g02272 262 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 91 246 IPR000182 GO:0016747
Vimu7g02272 262 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 74 IPR016181 -
Vimu7g02272 262 Pfam Acetyltransferase (GNAT) domain 2 61 IPR000182 GO:0016747
Vimu7g02272 262 Pfam Acetyltransferase (GNAT) domain 90 229 IPR000182 GO:0016747
Vimu7g02272 262 Gene3D - 77 257 - -
Vimu7g02272 262 Gene3D - 1 76 - -
Vimu7g02272 262 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 81 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02272 Vimu-Chr7 19749710 19752796 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu7g02272 Acetyltransf_3 1.9e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02272 - - cam:101514530 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02272 7 19749710 19752796 Vimu7g02272 7 19749710 19752796 ECH