Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02243 ATGGCTGCTGAATTTCTTGGTCTCTCTGTTGCAATGCTTCTGTTTTTCAATGTTCCAAGCATCGCCATTTCAATTGAACTTGGATCCGGCATTGTGGCTGGAAGTGCCACCAGTTCATCTTGGCGATCATCCTCCGGGGAATATGCTTTTGGATTCTACCACCTTGTCAGTGGCCGATATCTTGTTGCTATTTGGTTTGACAAAATTCCAGAAAAAACATTAGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAATTGGATCATCCATCAATCTCACACGAAGTGGCCAATTTGTGATCCGACCTCTCAACGGGGCTTCGTTTTCCATCTACGAAGGAACAAACACTGCATCAGCAGAAATGAAGGATGACGGGAATTTCGTCTTGAAGAATTCACTTTCCAATGTTATATGGCAGAGCTTTGATTCACCCACGGATACTCTTCTGTTAGGCCAAACTTTGAATAGCAGTCGGAAGCTCTATTCCAATGCCAATGGATCAGTTGATTATTCAACTGGACAATACAGTTTGGAGATCCAACAATCTGATGGCAACATTGTTCTCAAAGCTTATCGGTTCACGGATTCTGCCTACTGGTGGAGTGACACTGCCCAGAACACAGGTGTGAGAATTATTTTCGACAACGCAACAGCTTTTCTTTACGCGGTCAATGCAACCAACCAAATTATATTTAACATGACTACTGAAGTAGTGGGTGCAATCGAAGATTACTACCATCGTGTGTTGGTGGATGACAAGGGAAACTTTCAGAAGTTGATTTACCACAAAGAGAATGGAAGTGAGTGGAGATCTGTGTGGCAGGCCGTAACAAAGCCTTGCACTGTGACTGCCCTTTGTGGGGTGTATGGTTTTTGCAACACATCTGGTTCTGACACCCAAACATACAGTTGTGGTTGCTTGCCGGGCTATACTCCTTTGGATCCAACAGCACCTTCCAAGGGGTGCTATCTCAGTGAGGTCAAGGACTTGTGTGCTGCAAATTCTTCTGCCTCAAACTTTGAGGTGGAAGTGAAAGAGATTCAAGATGCTGATATACCAAATTCCGGTTACTTTTTTCTTGATCTGCAAGTCTTGGATAGGATGGATTTGGAAAGCTGCAAGAGGGAACTGATGGATGATTGTCTATGTATGGCTGCTGTTTTAGATGGCACTGCTTGCCATAAGAAAAAGTGGCCAATTATAAATGCCATAAGAATCATCCCTGACACTAGTAATCGTGTGATGCTAATTAAAGTTCCTCTGCTTGACAACAACAAGGACAACGAAAGGGATTCACCGTCTGTGGTTGTTTTGGTAGTGGCTCTCATTTCTTGCTCCCTACTTGCTGTCCTGTTTGCAGCCACTGCCATTTATCATCACCCCGTTTTCATAATGTCTTTAACTATATTTTTGCCTTGCATTGCTGCACTTCTTTCACTTTCAAATCTGAATGGCTTACATGCCATACAATCAAATACAAGCATCACTGCTGGATCCAATTCTACCTGGAAATCTTCCTCCAGTGATTTTGAATTTGGATTCTACCATCTTCCCAATCGTCTCTTTCTTGTGGGAATATGGTTTGGGAGAATCCCTGAGAGAACGCTGGTATGGTACCTGGCTCCTCCTGTGGAACCGAATTCCCAAATCCAATTCACTTCTGCAGGACAGCTTGTTGTAGTACACCCAAACGGGACTACTGCTCAGACCATATACAGCGGAGGAAACGGCGGGGCGGCAACATCTGCCACCATGCAAGACGATGGCAATTTTGTGATGAAGAACTCCAACTTAAGACCTGTGTGGGAGAGTTTCAACTTTCCAGCCGACACAATCTTGCCAGGCCAAACCTTGCAGACTAATCATAGCCTCTATTCCAAGGGGAGAGGACCTTCAAACTACTCATTGGGAAATTTCATGCTACAAATGCAAGGTGATGGCAACTTGTTGCTCAAAGCTCACCAATGGGCTGACCCTGCATACTGGTTCACTTCGACTACGACCCCAGATGTAAATCTGCTGTTTAATGCTACCACTGCTCTCATGTACCTTGTCGGCGGCGGCACCGGGAACATCTACTCTATAACCAACACCACTCCAACCCCGGTGGAGGATTATTATCATCGTGCTGCAATAGATGAAAATGGGAATTTCCAGCAATATGCATATCGCAAAAGGAACGGGAGCGGATGGAGCAGGGTTTGGAGAGCCGTGGAGGATCCCTGCAGAGTGAATGTTGTCTGTGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTCAGTGTCTTCCAGGTTATATCCCGTTGGATGATCAAGATGTTTCAAAAGGGTGTCGCCCACCAGCTGTCATCAATTACTGTGCAGAGAACAACTTCAAGCTCCAGGTCTTTGACGACACTGATTTCCATTTCGATACTCATCTTGTTAGGTTGGCTGGTGTTGACTTCGAAAGTTGTAAGAAGGATGTAATAGATGATTGTAATATCGGTGCTGCAACTTATAGCCAATCCACCTCCACATGTGTCAAGAAGAGATTGCCCTTGCTGAATGCTAGAAATAGCACTTCTTCGAAGGGACTGAAAGCGCTGCTTAAAGTTGCTGAAAGGGATGAGTCTGGGACACCTGAAGTTTCCAAGAAGAAAAGTTTTAATGTAAGAGTCCTTTTGAAGGCTCTTCTTGCTGTTACTGCCACTCTTGCCTGTTTCTTGGGTGCCCTTGCTGTCTACTATCATCCTTTCACTCGAAGACTAAGAAGAAAAAAGAAGCATCTGAATGCAACAGCTATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTCACTAGGATTCTTGGAAGGGGAGCTTCAGGCAAAGTCTATCGTGGTGCTTTAATAATAGACGGTGCAGAGATTGGTATTGCAGTAAAGAAACTCGAAAAGAAAATAGAGAAAAGTGAAAGAGAATTCATGACTGAGCTCAAAATTATTGGTCGTACGCATCACAGAAATTTGGTGAGGCTTTTGGGTTTTTGCATTGATAGTAGCCATCGAATTATAGTATATGAGCAACTAGAGGTAGTGGTGAGACATGACACAGAAGTGCTGAATGATTTCAAGAAGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGCGTTCATCCAAATCCAGCTTTGAGGCCTTCGATGAAGCAAGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGTGTTCCTCCTTTGGTTTACGATATGATGATGGCAGATCAGGGCTTATAG 3291 0.4424 MAAEFLGLSVAMLLFFNVPSIAISIELGSGIVAGSATSSSWRSSSGEYAFGFYHLVSGRYLVAIWFDKIPEKTLVWSANRDNPVEIGSSINLTRSGQFVIRPLNGASFSIYEGTNTASAEMKDDGNFVLKNSLSNVIWQSFDSPTDTLLLGQTLNSSRKLYSNANGSVDYSTGQYSLEIQQSDGNIVLKAYRFTDSAYWWSDTAQNTGVRIIFDNATAFLYAVNATNQIIFNMTTEVVGAIEDYYHRVLVDDKGNFQKLIYHKENGSEWRSVWQAVTKPCTVTALCGVYGFCNTSGSDTQTYSCGCLPGYTPLDPTAPSKGCYLSEVKDLCAANSSASNFEVEVKEIQDADIPNSGYFFLDLQVLDRMDLESCKRELMDDCLCMAAVLDGTACHKKKWPIINAIRIIPDTSNRVMLIKVPLLDNNKDNERDSPSVVVLVVALISCSLLAVLFAATAIYHHPVFIMSLTIFLPCIAALLSLSNLNGLHAIQSNTSITAGSNSTWKSSSSDFEFGFYHLPNRLFLVGIWFGRIPERTLVWYLAPPVEPNSQIQFTSAGQLVVVHPNGTTAQTIYSGGNGGAATSATMQDDGNFVMKNSNLRPVWESFNFPADTILPGQTLQTNHSLYSKGRGPSNYSLGNFMLQMQGDGNLLLKAHQWADPAYWFTSTTTPDVNLLFNATTALMYLVGGGTGNIYSITNTTPTPVEDYYHRAAIDENGNFQQYAYRKRNGSGWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCQCLPGYIPLDDQDVSKGCRPPAVINYCAENNFKLQVFDDTDFHFDTHLVRLAGVDFESCKKDVIDDCNIGAATYSQSTSTCVKKRLPLLNARNSTSSKGLKALLKVAERDESGTPEVSKKKSFNVRVLLKALLAVTATLACFLGALAVYYHPFTRRLRRKKKHLNATAIGINFREFTFQELHEATDGFTRILGRGASGKVYRGALIIDGAEIGIAVKKLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCIDSSHRIIVYEQLEVVVRHDTEVLNDFKKFEEMALVGLWCVHPNPALRPSMKQVMQMLDGTVEVGVPPLVYDMMMADQGL 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02243 1096 ProSiteProfiles Bulb-type lectin domain profile. 486 606 IPR001480 -
Vimu7g02243 1096 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 203 IPR036426 -
Vimu7g02243 1096 Gene3D Phosphorylase Kinase; domain 1 923 1028 - -
Vimu7g02243 1096 ProSiteProfiles Protein kinase domain profile. 950 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02243 1096 FunFam S-receptor-like serine/threonine-protein kinase 919 1028 - -
Vimu7g02243 1096 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1028 1084 - -
Vimu7g02243 1096 SMART tyrkin_6 950 1074 IPR020635 GO:0004713|GO:0006468
Vimu7g02243 1096 Coils Coil 980 1000 - -
Vimu7g02243 1096 ProSitePatterns Protein kinases ATP-binding region signature. 956 982 IPR017441 GO:0005524
Vimu7g02243 1096 CDD B_lectin 48 144 IPR001480 -
Vimu7g02243 1096 SUPERFAMILY alpha-D-mannose-specific plant lectins 522 666 IPR036426 -
Vimu7g02243 1096 SMART egf_5 279 323 IPR000742 -
Vimu7g02243 1096 SMART egf_5 741 783 IPR000742 -
Vimu7g02243 1096 FunFam Os04g0303100 protein 64 198 - -
Vimu7g02243 1096 Pfam S-locus glycoprotein domain 704 772 IPR000858 GO:0048544
Vimu7g02243 1096 Pfam S-locus glycoprotein domain 242 312 IPR000858 GO:0048544
Vimu7g02243 1096 Pfam D-mannose binding lectin 73 159 IPR001480 -
Vimu7g02243 1096 Pfam D-mannose binding lectin 543 623 IPR001480 -
Vimu7g02243 1096 Gene3D - 609 745 - -
Vimu7g02243 1096 Gene3D - 144 285 - -
Vimu7g02243 1096 ProSiteProfiles Bulb-type lectin domain profile. 28 142 IPR001480 -
Vimu7g02243 1096 SUPERFAMILY Protein kinase-like (PK-like) 937 1029 IPR011009 -
Vimu7g02243 1096 SMART blect_4 494 608 IPR001480 -
Vimu7g02243 1096 SMART blect_4 28 144 IPR001480 -
Vimu7g02243 1096 Pfam Protein tyrosine and serine/threonine kinase 953 1029 IPR001245 GO:0004672|GO:0006468
Vimu7g02243 1096 Gene3D - 33 143 IPR036426 -
Vimu7g02243 1096 Gene3D - 486 607 IPR036426 -
Vimu7g02243 1096 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 20 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02243 Vimu-Chr7 19618621 19624600 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02243 879 1027 Receptor kinase-like Gene Family AT2G43700 34.899 5.48e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vimu7g02243 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02243 - - vum:124841710 902.508