Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02223 ATGTATCTTTTCCTTTGGAATTTATCATTGAAGAATCCAATAGTTGATATGATGTATCCTTCTCATATGGTGGAATGGCTGAAGGTCTTCCACACAAGAGAGAGGAATCACTTTATTTCTGACACTTCAACGTGTTGTTTTGAGGTGCAGAAGAACTCAAACATGACAACAATGGAGATTCCAAACTTTGTCAGAGTTCACGAAGATGGCACCATCGAACGCCTCCAAGGCTCTCCCTTTGTGCCACCCAAGCTTCAAGATCCAACAACAAATCTATCATCGAAAGACGTTGTCATCTCAGATAAACCTCCCATCTCTGCTCGTCTATACCTTCCAAACGGAATCAGTAAAAATCTCAAACTCCCCATCTTGGTCTACTTTCACGGTGGAGGATTTTTCTTCGAATCCGCCTTCAGCCAACTCCACCAGAACTATTTCAACACGTTTCTCTCCGTTGCAGACATTTTAGTCGTTTCTGTGGAGTACAGGTTGGCGCCGGAGACTCCTCTTCCTGCGGCTTATCATGACTGCTGGGAAGCTCTGAAATGGGTGGCTACCAAGGCTGATCCGTGGGTTCTCAAACACGGCGATTTCGACAGAGTGTTCGTTGGAGGTGACAGTGCTGGCGCTAACATAGCGCATAACATTGCCATGCGAGCTGGGGCCGAAGCATTACCCGGTGGTGTGACAGTTTTAGGCGCTCTGGTTTCTCAACCCTTCTTCTTGGGATCAAAGCGAATCGGGAGTGAAACGGAAGAGAGCTTGTCCGTTAGGGTTTGGGAATGGATTCAGCCGTGTGACGGCGGTGGGTTTGACAACCCGTTGATAAATCCGCTGAGTAGTGCGGCGGCTTCGTTGAGTGGGCTTGGGTGTCGGAAGCTTCTGGTTTGCACGGCGGGGGTGGATGAGCTGAGGGAAAGAGGTTTGTGGTACTACGAGGCTGTGAAAAAGAGTGGGTGGGAAGGGAAAGTGGAACTGTACGAAGTGGACGGCGAGGATCACACTTTTCACGTCAACGATCCACGAACCCAGAATGCTCACAGCATGTTCAAACGCTTTGCAGATTTTATCCTTCATTAG 1080 0.4852 MYLFLWNLSLKNPIVDMMYPSHMVEWLKVFHTRERNHFISDTSTCCFEVQKNSNMTTMEIPNFVRVHEDGTIERLQGSPFVPPKLQDPTTNLSSKDVVISDKPPISARLYLPNGISKNLKLPILVYFHGGGFFFESAFSQLHQNYFNTFLSVADILVVSVEYRLAPETPLPAAYHDCWEALKWVATKADPWVLKHGDFDRVFVGGDSAGANIAHNIAMRAGAEALPGGVTVLGALVSQPFFLGSKRIGSETEESLSVRVWEWIQPCDGGGFDNPLINPLSSAAASLSGLGCRKLLVCTAGVDELRERGLWYYEAVKKSGWEGKVELYEVDGEDHTFHVNDPRTQNAHSMFKRFADFILH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02223 359 Pfam alpha/beta hydrolase fold 124 337 IPR013094 GO:0016787
Vimu7g02223 359 SUPERFAMILY alpha/beta-Hydrolases 58 357 IPR029058 -
Vimu7g02223 359 Gene3D alpha/beta hydrolase 62 359 IPR029058 -
Vimu7g02223 359 PANTHER ARYLACETAMIDE DEACETYLASE 59 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02223 Vimu-Chr7 19482490 19483569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02223 61 357 Carbohydrate Esterase AT1G19190 41.883 4.93e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02223 - K13258 gmx:100813532 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02223 7 19482490 19483569 Vimu7g02223 7 19482490 19483569 ECH
Vimu7g02223 7 19482490 19483569 Vimu3g03241 3 46131069 46132058 PCT
Vimu3g03240 3 46127346 46128365 Vimu7g02223 7 19482490 19483569 PCT