Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02207 ATGGTTACGCACGTATCCATGGCTTCGCTCAAGCTTGTGCTGCTGTTGTTCATTCTCAGCTTCTTCAACTTGAACACTTGCAAAGCACAGGAACAGAACACCGACCCTGTCTATCTGTACCATAACTGTTCAGGCGGCAACACCACCGCCAACAGTGCCTACCAACTAAACGTCGGCACCCTCTTCAGTTCCCTATCTTCAAAATCCATAGAATTCTCAAACGACACCGTCGGAACATCCTCCTCCGACAGGGTGTACGGACTGTTCATGTGCAGAGGAGACGTGCCCACAGCGCTGTGTCAACAGTGCGTGTTCAACGCAACGCGACGTCTCCGGTCAGAGTGCTCTCTGGCCAAACAGGCCGTGATATGGTACGACGAGTGCACTGTTCGCTACTCCAACCGCTCTTTCTTCTCCACGGTGGCCGTTCGGCCGCGTCTCGGACTCCTCAACACTGCCAACATATCCAACCAAGAATCCTTCATGAAACTGCTTTTCTCAACCATAAACACAACCGCGGATGAGGCTGCCAACTTTTCCGTGGGATTGAAGAAATACGCGACCAAGCAGGCCAACATTTCTGGGTTTCAGTCACTGTACTGTTTGGCTCAGTGCACACCCGATCTGTCCCCGCAAGACTGCAGAAGTTGTCTCAGTGGTGTGATTGGAGACCTTCCTTGGTGCTGTCAGGGAAAGCAGGGAGGAAGGGTTCTCTATCCTAGCTGCAACGTTAGGTACGAACTCTATCCTTTCTACCGCCAAGTCACACCCGCGCCTCCACCCTCATCTCCCCTACTTCCTCCTCCAGCTTCCGCTAATTCCCAAGGAGGCGGTGGGATCTCAACTGGGACCATTGTTGCGATTGTGGTTCCAATTACAGTAGCCGTGCTTCTATTTATAGTGGGAATTTGTTTCTTGAGTAGAAGAGCTAGAAAGAATCAGGGTTCTCTAAAGGAAGGAAAAAATGTAGATGACATCACCACTGTGGAGTCCTTGCAATTCAGCTTTGGCACGATTTCAGCGGCCACAAACAATTTCTCTGCGGAAAATAAGCTGGGGGAGGGTGGATTTGGTGAGGTTTTCAAGGGTGCTCTTCCTACTGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGTTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTCCAACATAGAAATTTAGTGAGGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATATGTTCCCAACAAAAGTCTCGATTACACTCTCTTCGACCCTGAAAAGCAAAGGGAGTTGGATTGGAGGAGACGTTACAAGATTATTGAAGGGACTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACATCGAGATCTTAAAGCAAGTAACATATTGTTAGATAGCGATTTGAGTCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACGGACAGAATTGTAGGAACCTAG 1536 0.4785 MVTHVSMASLKLVLLLFILSFFNLNTCKAQEQNTDPVYLYHNCSGGNTTANSAYQLNVGTLFSSLSSKSIEFSNDTVGTSSSDRVYGLFMCRGDVPTALCQQCVFNATRRLRSECSLAKQAVIWYDECTVRYSNRSFFSTVAVRPRLGLLNTANISNQESFMKLLFSTINTTADEAANFSVGLKKYATKQANISGFQSLYCLAQCTPDLSPQDCRSCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRQVTPAPPPSSPLLPPPASANSQGGGGISTGTIVAIVVPITVAVLLFIVGICFLSRRARKNQGSLKEGKNVDDITTVESLQFSFGTISAATNNFSAENKLGEGGFGEVFKGALPTGQEIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVRLLGFCLQGEEKILVYEYVPNKSLDYTLFDPEKQRELDWRRRYKIIEGTARGIQYLHEDSRLRIIHRDLKASNILLDSDLSPKISDFGMARIFGVDQTQGNTDRIVGT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02207 511 ProSiteProfiles Protein kinase domain profile. 346 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02207 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Vimu7g02207 511 Gene3D Transferase(Phosphotransferase) domain 1 422 511 - -
Vimu7g02207 511 Gene3D - 35 137 IPR038408 -
Vimu7g02207 511 Gene3D - 147 251 IPR038408 -
Vimu7g02207 511 Pfam Salt stress response/antifungal 43 134 IPR002902 -
Vimu7g02207 511 Pfam Salt stress response/antifungal 155 249 IPR002902 -
Vimu7g02207 511 FunFam Cysteine-rich receptor-like protein kinase 25 145 251 - -
Vimu7g02207 511 SUPERFAMILY Protein kinase-like (PK-like) 327 511 IPR011009 -
Vimu7g02207 511 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 36 136 - -
Vimu7g02207 511 SMART serkin_6 346 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02207 511 Pfam Protein kinase domain 347 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02207 511 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Vimu7g02207 511 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Vimu7g02207 511 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Vimu7g02207 511 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 511 - -
Vimu7g02207 511 FunFam Cysteine-rich receptor-like protein kinase 10 308 421 - -
Vimu7g02207 511 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 422 511 - -
Vimu7g02207 511 ProSiteProfiles Gnk2-homologous domain profile. 36 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02207 Vimu-Chr7 19374516 19376691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02207 34 511 Receptor kinase-like Gene Family AT4G05200 56.653 1.69e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vimu7g02207 Pkinase 3.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02207 - - vun:114173511 879.011