Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02206 ATGGCTCCAGAGTATGCAATGGAAGGATTGTTTAGTGTGAAATCCGATGTGTTCAGCTTTGGCGTTATCTTGCTTGAAATCATCAGCGGAAAAAGAAACAGTGGTTTTTACCAAACCGAACTTGCCCCGACACTGCTGGCATATGTAAGTGAAAACACTTTCGTCGCATGGCGAGTATGGAATGAAGGAAAAGCATTGGACTTTGTGGATCCAGTGGTGTTGGAATCATGCCTTGCATCTGAAGTTGAAAATCCGGAACACAGGCCCACCATGTCAGCCGTGATGCTTCTCCTGGGAAGTGAATCAATGGTCCTTCCCCAACCAAAACAACCTGCTTTTTCTTTGAGAAGGGTGCTTCGTCTCGATCCATCTTCAAAAACCAATCCTTCAGAAAACGAGATTATATTTTCTGATATTTTACCTCGTATTCTTGACCTATGGACAAATGTTCCTTTCATGGCTGTCCCCACCCAACCCATCCTCGCATAG 489 0.4458 MAPEYAMEGLFSVKSDVFSFGVILLEIISGKRNSGFYQTELAPTLLAYVSENTFVAWRVWNEGKALDFVDPVVLESCLASEVENPEHRPTMSAVMLLLGSESMVLPQPKQPAFSLRRVLRLDPSSKTNPSENEIIFSDILPRILDLWTNVPFMAVPTQPILA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02206 162 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Vimu7g02206 162 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Vimu7g02206 162 ProSiteProfiles Protein kinase domain profile. 1 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g02206 162 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 125 - -
Vimu7g02206 162 Pfam Protein tyrosine and serine/threonine kinase 1 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02206 Vimu-Chr7 19373273 19373930 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02206 1 142 Receptor kinase-like Gene Family AT4G23150 44.444 3.47e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vimu7g02206 PK_Tyr_Ser-Thr 4.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02206 - - gmx:102669229 214.927