Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02177 ATGAGGGGCGGAGAGGAGAGACAGACGGCGACCGGGATTCGGAAGAAGGGAAGCGGAGTGAGGCAATGGCTGATGCTCGACGGAAAAGGGGAGACGGAGGTGGTGGAGGCCGGCAAGCACGCCATCATGAGGCGCACCGGCCTCCCCGCCCGTGATCTCCGCATATTGGACCCTCTCCTTTCCTACCCTTCCACCCTTCTTGGCCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCACGTGACCCCTCCGTCACCCCCTTCGTCCAAGAGCTCCAGGCCAGGATCCTCCGCCACCACCAGGCCTCTTCCAAACACCACGACCACCGCACCGACTCCGACCCCGACCACGACCACGACCCCGATGCCATCAAGATTCTCCCTTTCGAGTTCGTGGCCCTGGAGGCCTGCCTTGAAGCCGCCTGTAGCGTATTGGAGAACGAGGTCCGTGCTTCCCTCTTCTCTTTTCATTTCTTCCTGACAATTTCCCTCTGTATTCACCCTAAATCCCTCTCTCCCTCTGATTACTCACAGGCAAAGACGTTGGAGCAGGAGGCTCATCCCGCCTTGGACAAGCTCACATCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGCCGTGTTCAGAAGGTGAGGGATGAATTGGAGCACTTGCTGGACGACGATGATGATATGGCTGAGATGTATCTGACGGAAAAGACCACTACAGAAATATCCTTTGAGGCTGTGACCCCCCCGGTGGGCTTCGAGGATCAACACAATGCCTACAATGTTCTTGGAAGGGACAGCCATGGAACCCGTGGTAGCACTTACAGTGCCGTCACCAAGCAGCTTGATGTCGAGGAGCTTGAAATGCTTTTGGAGGCTTACTTTGTGCAGATCGATGGCACCTTGAACAAGCTCTCAACGCTGAGGGAATATGTTGATGACACGGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCCGGAGTTTTTGGCATGAATATTCACATTGAGCTATTTGATCCAGATAAAGCCGGGATGACAGAGTTCCTTTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTAGTTGCCATTGCCTGGTGTAAGCAGAAACGCTTGCTGGAGTAA 1272 0.5377 MRGGEERQTATGIRKKGSGVRQWLMLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVQELQARILRHHQASSKHHDHRTDSDPDHDHDPDAIKILPFEFVALEACLEAACSVLENEVRASLFSFHFFLTISLCIHPKSLSPSDYSQAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTEKTTTEISFEAVTPPVGFEDQHNAYNVLGRDSHGTRGSTYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDPDKAGMTEFLWTVGGSTAGTIFLYVVAIAWCKQKRLLE 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02177 423 Gene3D Magnesium transport protein CorA, transmembrane region 186 351 - -
Vimu7g02177 423 FunFam Magnesium transporter MRS2-E 168 351 - -
Vimu7g02177 423 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 191 422 IPR039204 -
Vimu7g02177 423 Gene3D - 9 94 - -
Vimu7g02177 423 Gene3D Magnesium transport protein CorA, transmembrane region 97 168 - -
Vimu7g02177 423 FunFam Magnesium transporter MRS2-1 11 94 - -
Vimu7g02177 423 MobiDBLite consensus disorder prediction 113 133 - -
Vimu7g02177 423 CDD Mrs2_Mfm1p-like 23 421 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02177 Vimu-Chr7 19227972 19231025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02177 23 423 MRS2 Gene Family AT3G19640 58.974 2.01e-174 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02177 - - gmx:100819578 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02177 7 19227972 19231025 Vimu7g02177 7 19227972 19231025 ECH