Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02105 ATGGCTCCGCTGATCCTGCATGGTGGCAAAACAAACAAAAATTCCTTCAAGACACTTATTGCAGCGGAGTACGTAGGCGTTCAAGTTGAGCTTGCTCCAAATTTTGAGATGGGTGTATCTAATAAAACTCCTCAATTTCTCCAGATGAATCCTATTGGCAAGGTTCCTGTCTTGGAAACACCCGATGGTCCAGTTTTTGAGAGCAATTCCATTGCTCGCTATGGTTGTTTTGCTGTAGTTGCCCGGCTCAAAGGTGACAACATTTTGTACGGTTCATCTTTGATTCAATACGCCCAGATTGAACAGTGGATTGATTTTGCATCACTTGAGATTGATGCCAATATTATTAAGTGGTATGCCCCAAGAGTTGGACGAGGACCATACCTTCCTCCGGCTGAGGAGGCTGCAATTTCTGCACTGAAGAGAGCTTTGGGTGCTTTGAACACTCACCTCGCCTCCAATACTTACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATATTGACATGCAATTTGTATTTGGGTTTCGCAAACATCCTTGTTAAGAGCTTCACCTCTGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAACTTCCGAAAGATATTTGGGCAGGTCAAGCAGACTGACTCTGTTCCACCTCTTCAATCTGCAAAGAAGCCTTCGCAGCCAAAAGAAACTAAGCCCAAGGCCAAAGATGAGCCAAAGAAAGAGGCTATAAAAGAGCCAGAAAAGCCCAAAGAAGCAGCAGAAGAAGAGGCACCTAAGCCTAAACCCAAGAATCCCCTTGATCTTCTCCCTCCAAGTCCTATGATACTGGATGAGTGGAAAAGACTGTACTCCAACACTAAAACAAACTTCAGGGAGGTTGCTATCAAAGGTAATGTTTCTGTAACCCCTCCGGAGTCATTAGGCAGGTTCATTTTAAAACCTTTTTATCTTGCAGGATTTTGGGACATGTATGATGCTGAGGGTTACTCTCTCTGGTTTTGTGATTACAAATACAATGATGAGAATACTGTTTCTTTCGTGACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCTCGCAAGTATGCATTTGGAAAGATGCTAGTGATTGGATCAAATCCACCGTTTAAGGTGAAGGGGCTGTGGCTTTTCCGTGGGCAAGAAATCCCGAAGTTCGTGATTGATGAATGCTATGACATGGAACTTTACGAGTGGACGAAGGTTGACATATCTGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATAGAAGATTTCGAACCTTTTGAGGGCGAGGCTCTTCTGGATGCCAAGTGCTTTAAGTGA 1344 0.4405 MAPLILHGGKTNKNSFKTLIAAEYVGVQVELAPNFEMGVSNKTPQFLQMNPIGKVPVLETPDGPVFESNSIARYGCFAVVARLKGDNILYGSSLIQYAQIEQWIDFASLEIDANIIKWYAPRVGRGPYLPPAEEAAISALKRALGALNTHLASNTYLVGHSVTLADIILTCNLYLGFANILVKSFTSEFPHVERYFWTLVNQPNFRKIFGQVKQTDSVPPLQSAKKPSQPKETKPKAKDEPKKEAIKEPEKPKEAAEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGNVSVTPPESLGRFILKPFYLAGFWDMYDAEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSNPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDFEPFEGEALLDAKCFK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02105 447 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 221 IPR010987 -
Vimu7g02105 447 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 308 IPR044628 GO:0004364
Vimu7g02105 447 FunFam Elongation factor 1 gamma 86 222 - -
Vimu7g02105 447 Pfam Elongation factor 1 gamma, conserved domain 320 394 IPR001662 GO:0003746|GO:0006414
Vimu7g02105 447 Pfam Elongation factor 1 gamma, conserved domain 264 292 IPR001662 GO:0003746|GO:0006414
Vimu7g02105 447 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 265 447 IPR036433 GO:0003746|GO:0006414
Vimu7g02105 447 SUPERFAMILY eEF1-gamma domain 265 447 IPR036433 GO:0003746|GO:0006414
Vimu7g02105 447 CDD GST_N_EF1Bgamma 6 74 - -
Vimu7g02105 447 Gene3D Glutaredoxin 1 74 - -
Vimu7g02105 447 SMART EF1G_2 264 394 IPR001662 GO:0003746|GO:0006414
Vimu7g02105 447 SFLD Main (cytGST) 6 196 - -
Vimu7g02105 447 MobiDBLite consensus disorder prediction 229 265 - -
Vimu7g02105 447 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vimu7g02105 447 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vimu7g02105 447 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vimu7g02105 447 SUPERFAMILY GST C-terminal domain-like 84 217 IPR036282 -
Vimu7g02105 447 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 265 447 IPR001662 GO:0003746|GO:0006414
Vimu7g02105 447 FunFam Elongation factor 1B gamma 3 74 - -
Vimu7g02105 447 Pfam Glutathione S-transferase, C-terminal domain 136 203 IPR004046 -
Vimu7g02105 447 CDD GST_C_EF1Bgamma_like 96 216 - -
Vimu7g02105 447 FunFam Elongation factor 1-gamma 1 316 447 - -
Vimu7g02105 447 SFLD Glutathione Transferase (cytosolic) 6 196 IPR040079 -
Vimu7g02105 447 Gene3D - 86 221 - -
Vimu7g02105 447 MobiDBLite consensus disorder prediction 216 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02105 Vimu-Chr7 18670234 18672818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02105 4 447 Eukaryotic Initiation Factors Gene Family AT1G57720 71.171 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02105 K03233 - gmx:547637 719.153