Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02050 ATGGTGTTTGAAAGTTTATGGCTTGTGTTGCAGAATCAAACACCGAATATGGCTGACTTGTTGGAATGGCCAAAGAAAGATAACCGTCGCATGCTCCATGTTGTCTACCGTGTTGGTGACCTTGATCGCACCATCAAGTTTTATACAGAATGCTTTGGAATGAAGCTTTTAAGGCATAGAGATATCCCGGATGAAAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTCGAATTAACATATAATTATGGGGTGACCTCGTATGAGATAGGGGATGGCTTTGGGCATTTTGCAATTGCAACTCAGGATATTTACAAATCGGTTGAGCTCGTCCGAGCCAAGGGAGGAAACATCACTAGGGAGCCTGGACCAGTTCAGGGTGGGACTACTGTTATTGCCTTTGTGAAGGATCCAGATGGTTACACTTTTGGATTTATCCAAAGACCTACTGTCCATGATCCATTTTGTCAAGTAATGCTTCGTGTTGGAGATTTAGAACGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTTTTAAGGAAGGTTGATAAGCCTGAGTCCAAGTACACTGCAGTTATGCTTGGGTATGGAGAGGAGCATGAGACAACTGTGTTGGAGTTGACAAATAACTATGGTGTCACTGAATACTCTAAGGGCAATGCCTATGCACAGATTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTAGTTAGCCAAGTTATACAAGAGGTAGGAGGGAAGATTACAAGGCAACCGGGGCCAATTCCTGGCCTTAATACGAAAATCACTGCGTTTTTAGATCCAGACGGATGGAAAACTGTGAGTCTCTCCCTTCCTCTCACCATATTGAGTAGATGA 888 0.4279 MVFESLWLVLQNQTPNMADLLEWPKKDNRRMLHVVYRVGDLDRTIKFYTECFGMKLLRHRDIPDEKYANAFLGFGPEESHFVVELTYNYGVTSYEIGDGFGHFAIATQDIYKSVELVRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGFIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVLRKVDKPESKYTAVMLGYGEEHETTVLELTNNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSQVIQEVGGKITRQPGPIPGLNTKITAFLDPDGWKTVSLSLPLTILSR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02050 295 ProSitePatterns Glyoxalase I signature 1. 33 54 IPR018146 GO:0004462|GO:0046872
Vimu7g02050 295 PANTHER LACTOYLGLUTATHIONE LYASE 16 285 - -
Vimu7g02050 295 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 161 282 IPR029068 -
Vimu7g02050 295 CDD GlxI_Ni 31 152 - -
Vimu7g02050 295 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 160 288 IPR037523 -
Vimu7g02050 295 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 30 154 IPR037523 -
Vimu7g02050 295 Gene3D - 157 287 IPR029068 -
Vimu7g02050 295 NCBIfam lactoylglutathione lyase 30 154 IPR004361 GO:0004462|GO:0046872
Vimu7g02050 295 Gene3D - 9 154 IPR029068 -
Vimu7g02050 295 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 31 150 IPR004360 -
Vimu7g02050 295 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 281 IPR004360 -
Vimu7g02050 295 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 29 160 IPR029068 -
Vimu7g02050 295 ProSitePatterns Glyoxalase I signature 1. 163 184 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02050 Vimu-Chr7 18320740 18322858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02050 163 281 Calmodulin-binding Proteins AT1G08110 29.861 9.21e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02050 K01759 - gmx:100793089 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02050 7 18320740 18322858 Vimu7g02050 7 18320740 18322858 ECH
Vimu2g01103 2 7306836 7309263 Vimu7g02050 7 18320740 18322858 ECH
Vimu7g02050 7 18320740 18322858 Vimu2g01103 2 7306836 7309263 PCT