Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02028 ATGGCGAAAGTGATTGCTGTTTCCATAGGTTTGCCATTGATGGCAGTGATTCTGATCTCCATGTTCATGGCTGCTATAACTTGCTTGAAGGAAGAAGAGCGTTCCATATATTTGGTCTTAATGGAAGGAGATGCACTTGCTTTTACTCAACAACCTTCTATTCACCAACATTCATCCAACAGGGAAGCTTCAAAGACACATGCAAAGCACTTAATATCATCTCACGATCTATTTCTGCAAACAACCTTGGATACAGGAAGCTACAACAAACTCCACAGTTACAAAAACATTATCAATGGTTTTTCTGTCCACACAACCCCTTCCCAGGCTGAAAGACTAAAAAGTAAGCCGGGAGTTAAGTTGGTAGAGAAAGACAGAGGAGTGAAAAGGATGACAACATACACACCTGAATTTCTAAGTTTACCAAAGGGAATATGGGCGCAAGAAGGAGGAGAAACAAATGCAGGTGAAGGAGTTGTGATTGGTTTCGTGGATAGTGGCATCAACCCTTTTCATCCAAGCTTTGCTTACGATCCCATGCTACCTTTCAAATCAAACCTCTCTCGTTTTGAGGGTGCCTGCATTACGGGTCCTCTATTCCCTCCTACTTCCTGCAATGGAAAGATAGTGGCCGCCAGGTACTTCTCTGCTGGGGCTGAAGCTGCTGCTACCCTCGATCCTTCCAAGGATTTTCTTTCACCCTATGATGCAGATGGACATGGCAGTCATGTGGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTAGTCAACAGTTTTTCCTACGGGAAAGCTAGTGGAATAGCACCACGTGCAAGGATTGCAGTTTATAAGGCTATGTATCCATCCGTGGCAACTCTAGCAGATGTTATTGCTGCGATCGATCACGCTGTTCTTGATGGAGTGGATATCTTATCGCTATCTGTGGGACCAAACGGACCACCAGAAGACACGTTAACATTCTTAAGCATGTTTGACATTTCTTTGTTGTTTGCACGAAAAGCAGGAGTTCTCGTGGTGCAAGCTGCGGGGAACAACGGTCCCGCATCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTCACTGTTGCCGCTAGCACCACAAACAGAAGGTACCCTTCTTCTCTTGTACTTGGAAATGGCGCAGTACTTAGTGGCGTGGGACTATCAGGACCAAGTTTTGGAAATGGATCAGTTTGGCATAAGCTTGTTTTAGCTAAGGATGCGGTCAAAAAGAGTGGAACAAGTCCAAAGACTGAGGAGTACATTGAGGAGTGCCAACATCCAGAAGTTTTGGACCCTCACATAGTATTGGGAAGTATCATTATCTGCACATTCTCAGGTGGGTTCTATAATGCCACCTCAACTCTTGCTGGTATTATTGGCACCGTGAAGGCTCTGGGATTGGAGGGCTTTGTTTTAGTTGCGAACCCACGCTATGGTGATTATATTGCAGAGCCAATGCCTTTTGCCTTTTCTGGTATTTTGATCCCTCGTGTGGAGGATGCCAAGGCTATATTAAAGTACTATGAAGAAAAAACAAAGAGGAACAAGAAAGGAAACGCCAGAGAGTTTGGTGCTTTGGCAGCTGTGGGAGAAGGAAGACTTGCCTCTTTCACAGGGAGATCGCCAATAGTCAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACCATAAAAAACATGTTGCAGATGTACTTAAACCTGATATTCTTGCTCCAGGACACCAAATCTGGGCAGCCTGGGCCCCCATCAGTGCCTCAGAACCTTTCTTCAGAGGGAACAGTTTTGCATTGTTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTGATGAAGCAACACAATCCATCATGGACTCCATCCATGATAGCTTCTGCGATCTCTACAACAAGCTCAAAGTATGACCATCTTGGACAGCCTATAATGGCAGAAGGCTATGAGGTCAACACCTTGCTACCCGCCACTCCTTTTGATTACGGCTCAGGCTTTGTCAACCCCAGTCGTGCCGTTGATCCTGGTTTGGTACTTTCATCAGATTATGCAGACTTCATCAGCTTCCTGTGCTCTTTGCCGGACGTAGACACGGATGCAGTCGTTGCAGCTACTGGAGAACAATGCAATCACCCATTTGCCTATCCTTTCAGTCTAAACCTTCCTTCAGTTACAGTGTCTGCACTGAGAGGATCAGTTTCTGTCCGAAGAACTTTCACGAATGTGGGGAACACCACAGAGACGTACTTGGCCACTGTTCGTCCACCAAATGGAACTGACATCTGCCTCCATCCAACTTGGTTTACCTTAACTCCGCAAGGAACGCAAGATTTGGATATACATATCAGTGTCGTCCAACCAATGCAGAATTTTACCTTTGGTGAAATTGTTCTCACAGGAAATTTAAACCACATTGTACGAATAACATTGTCAGTGTTCGCGATTTCAGTGTAA 2466 0.453 MAKVIAVSIGLPLMAVILISMFMAAITCLKEEERSIYLVLMEGDALAFTQQPSIHQHSSNREASKTHAKHLISSHDLFLQTTLDTGSYNKLHSYKNIINGFSVHTTPSQAERLKSKPGVKLVEKDRGVKRMTTYTPEFLSLPKGIWAQEGGETNAGEGVVIGFVDSGINPFHPSFAYDPMLPFKSNLSRFEGACITGPLFPPTSCNGKIVAARYFSAGAEAAATLDPSKDFLSPYDADGHGSHVASIAAGNAGVPVVVNSFSYGKASGIAPRARIAVYKAMYPSVATLADVIAAIDHAVLDGVDILSLSVGPNGPPEDTLTFLSMFDISLLFARKAGVLVVQAAGNNGPASSSVVSFSPWSVTVAASTTNRRYPSSLVLGNGAVLSGVGLSGPSFGNGSVWHKLVLAKDAVKKSGTSPKTEEYIEECQHPEVLDPHIVLGSIIICTFSGGFYNATSTLAGIIGTVKALGLEGFVLVANPRYGDYIAEPMPFAFSGILIPRVEDAKAILKYYEEKTKRNKKGNAREFGALAAVGEGRLASFTGRSPIVSRFSSRGPDIIDHKKHVADVLKPDILAPGHQIWAAWAPISASEPFFRGNSFALLSGTSMSTPHVAGIAALMKQHNPSWTPSMIASAISTTSSKYDHLGQPIMAEGYEVNTLLPATPFDYGSGFVNPSRAVDPGLVLSSDYADFISFLCSLPDVDTDAVVAATGEQCNHPFAYPFSLNLPSVTVSALRGSVSVRRTFTNVGNTTETYLATVRPPNGTDICLHPTWFTLTPQGTQDLDIHISVVQPMQNFTFGEIVLTGNLNHIVRITLSVFAISV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02028 821 ProSitePatterns Serine proteases, subtilase family, histidine active site. 240 250 IPR022398 -
Vimu7g02028 821 Gene3D - 694 818 - -
Vimu7g02028 821 ProSiteProfiles Serine proteases, subtilase domain profile. 136 677 - -
Vimu7g02028 821 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 81 814 IPR045051 -
Vimu7g02028 821 Pfam Peptidase inhibitor I9 62 130 IPR010259 -
Vimu7g02028 821 ProSitePatterns Serine proteases, subtilase family, serine active site. 603 613 IPR023828 -
Vimu7g02028 821 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 130 IPR037045 -
Vimu7g02028 821 CDD PA_subtilisin_like 376 511 - -
Vimu7g02028 821 Gene3D Peptidase S8/S53 domain 158 690 IPR036852 GO:0004252|GO:0006508
Vimu7g02028 821 Gene3D - 370 540 - -
Vimu7g02028 821 SUPERFAMILY Subtilisin-like 131 681 IPR036852 GO:0004252|GO:0006508
Vimu7g02028 821 CDD Peptidases_S8_3 131 639 IPR034197 -
Vimu7g02028 821 PRINTS Subtilisin serine protease family (S8) signature 602 618 IPR015500 -
Vimu7g02028 821 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Vimu7g02028 821 PRINTS Subtilisin serine protease family (S8) signature 236 249 IPR015500 -
Vimu7g02028 821 Pfam Subtilase family 156 641 IPR000209 GO:0006508|GO:0008236
Vimu7g02028 821 SUPERFAMILY Protease propeptides/inhibitors 88 128 - -
Vimu7g02028 821 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 161 172 IPR023827 -
Vimu7g02028 821 Pfam Fibronectin type-III domain 723 816 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02028 Vimu-Chr7 18173280 18178552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02028 14 819 Subtilisin-like Serine Gene Family AT1G62340 57.473 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02028 - - gmx:100798915 1271.53