Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02024 ATGAAAGCTTCAAAGCAGCAGCAGCAGAAGCAGAATCAGCTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGCTGCAGGTTCAGTGTTTCTTCTTCTGAAGAAGCAGAAAGCTCAGCCTCTGATAGGTTCCCTTCTGTTTCAAGCCTTGCACACGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGATGGAAGCTAGTCATGTAGAGAGAAGAAGACAGCAGAGCAGTGAAGGGACAAAGTTTGTCGTGATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGTAGATTTTAGAGAGTCCATGATGGAGATGATAACTGCCAACCGCCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCCATGAACTCTAATCACTACCATACTCTTATACTTGAGGTTTTTCATGAGGACGTGTCATGTAAAGATGTACATCAGTGGTTGGCTGCTTTGTCCATGGCAATCTGA 495 0.4404 MKASKQQQQKQNQLQQRGCKALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIRERMEASHVERRRQQSSEGTKFVVMVAMEKSSYDPRVDFRESMMEMITANRLQDAKDLRSLLNYYISMNSNHYHTLILEVFHEDVSCKDVHQWLAALSMAI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02024 164 ProSiteProfiles OVATE domain profile. 91 150 IPR006458 -
Vimu7g02024 164 Pfam Transcriptional repressor, ovate 95 146 IPR006458 -
Vimu7g02024 164 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 11 146 IPR038933 GO:0045892
Vimu7g02024 164 NCBIfam uncharacterized plant-specific domain TIGR01568 89 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02024 Vimu-Chr7 18132954 18133743 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vimu7g02024 Ovate 1.9e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02024 - - var:108330150 256.914