Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01994 CTGTATAAGCTGTGCTCGGTGCGGCAGAACAAAGAGAGGGCGGTGAGCGCGGGGGCAGTGAAGCCGCTGGTGGAGCTGGTGGCGGAGGAAGGGAGCGGGATGGCGGACAAGGCGATGGTGGTGCTAAACAGCTTGGCGGGGATTGAGGAGGGAAAAGAGGCGATCGTGGAAGAAGGTGGTATTGCTGCGCTCGTGGAGGCGATCGAAGATGGGTCGGTGAAGGGGAAGGAGTTCGCTGTTCTGACTCTTGTTCAGCTCTGTGCTCACAGTGTTAATAACAGAGGCTTGCTTGTGAGAGAGGGCGGGATTCCTCCTCTCGTTGCTCTTTCTCAGAACGGCTCTGTTCGAGCTAAGCACAAGGTATGTTTGTTTGTTGCTTCCTATATCTTTCTCTCCCACCTTTATTGTTGTTTCTCAGTTATGTTTAATTGCTGTGATGTTTTAACTGAATAA 453 0.5232 MYKLCSVRQNKERAVSAGAVKPLVELVAEEGSGMADKAMVVLNSLAGIEEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLVQLCAHSVNNRGLLVREGGIPPLVALSQNGSVRAKHKVCLFVASYIFLSHLYCCFSVMFNCCDVLTE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01994 150 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 18 60 IPR000225 GO:0005515
Vimu7g01994 150 SUPERFAMILY ARM repeat 4 130 IPR016024 -
Vimu7g01994 150 PANTHER U BOX DOMAIN-CONTAINING 2 120 - -
Vimu7g01994 150 Gene3D - 1 135 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01994 1 120 U-box Gene Family AT5G67340 50.000 3.55e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01994 - - gmx:100792402 211.846