Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01968 ATGGAGATGGAGTACCCAGAAAACTACTGCTACAGAAGCAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGAGAAAGAAGAAGAAAAAGAAGAAGAAAAAGAAGAACAAGACTGTGTTTATGTTGCAGTGGGTAAGAGCAACACAAGCATGCACGCTCTCTCATGGACACTTAACAACTTGGTTACTCAATCTACCATCATTTTTCTCATTCATGTATTCCCTCAGATCAAACACATTCCAAATCCCCTGGGAATAGGAATGGTTCCAAGGAATCAAGTGAGTGTTGAGCAGGTGGAGAGTTATGTTGAGCAAGAAAGAGGCAAAAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGTTCTTCTTCCAAGGTTAAGGTAGACACCATCCTGATTGAGAGTGACATGGTTGCAAAGCCTATCCTCGACCTCATTCCCATTCTTCAGATTAAAACTCTAGTCATTGGAGCCAACAAATTCCATCTGAGGTACACCACTAATTACATATGCATGCTGATTATTCGTTATAGTATTTCAGCACTAATTAATATACAACGTTTGATTAACAGAAAATCAAAATCAAGGAAAGGGAATAATAGTGTTGCTGATGAGATACTGAGAAATTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGATGATGATGTCACCCACTAACCATACTTCCATGACTAGCCAAAAGAAAGAAGATATCCATGATTCAGTTTCATGCATTTGTTTCATACCCAAGTTCAAATGA 789 0.3954 MEMEYPENYCYRSSSSVCEIEEEEEKEEEKEEEKEEQDCVYVAVGKSNTSMHALSWTLNNLVTQSTIIFLIHVFPQIKHIPNPLGIGMVPRNQVSVEQVESYVEQERGKRRELLQKFLQSCSSSKVKVDTILIESDMVAKPILDLIPILQIKTLVIGANKFHLRYTTNYICMLIIRYSISALINIQRLINRKSKSRKGNNSVADEILRNSPESCKVRIICEGKEVNEQMMMMSPTNHTSMTSQKKEDIHDSVSCICFIPKFK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01968 262 Coils Coil 16 40 - -
Vimu7g01968 262 Gene3D HUPs 32 162 IPR014729 -
Vimu7g01968 262 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 9 261 - -
Vimu7g01968 262 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 40 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01968 Vimu-Chr7 17765914 17766867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01968 39 174 U-box Gene Family AT4G25160 27.737 1.53e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01968 - - vra:106768035 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01968 7 17765914 17766867 Vimu2g01248 2 8333112 8334548 PCT