Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01967 ATGGGTTCGGAAAGGGAGCAGGATGAAGAAAACTCGAATTGCTTTAGACGTGGTTTTTTAGGGTTCAAGAGAAACCAAGTTATAGATTGCAGCGAGATGGTAGATTCAGATTCGGAGGATCTGTTTGAGATTAATCTGAAGGAGTCTTTGGTTTTGGAAACCATAAGAGAAGACTGCGAGAGCACCGTGTTCTCTCTTGATATCCACAACTGTAATAATGATGATGACGACGATGATGATGTTGTTTATGTGGCAGTAGGCAACGACGATGAACATTCCAGTCCAAGCATGGAAGCTCTTTCATGGGCCCTGAAACACGCCGTGACACCCTCTGCCACCGTAGTTCGTCTTCTACACGTTTTCCCTCAAGTCAAGCTCATTCCAAGTCCATTAGGAAAAATTCCAAGGAATCACGTTAATGAAGAGTATGCTGACGTGCACTTAGCACAAGAGAGAGCCAAGAGGAAATTGCTACTTCAAAAGTTCATTGACCTCTGCGTTCATTCTAAGGTTAAGGTGGAGGTGATGCTGATTGAGGGTGACAATGTTGCTAAAGCCATCATGGAGCATGTTGGAAATCTTAATATAAGAAAAGTGGTTGTCGGAATTTCGAGATCTAATTTAAGTAGAAAATGTGAATCTGGAAGGAAGAGTGGCATAGCGGGCAAGGTACTAAAATACGCACAGGAAAGTTGTGATGTAAAAATCATATGTGAAGGAAGAGAAGTGATAGAGCAGATGAGTGACAATGGAAGTTCAACAGCTTCGCAGGAAATAAATGAATTCAGGGGATTTCTCCCATTTAAGCATGTTATGTCCAGTTGGGTAAGCTTATTTAGGTCCATCATCACCAGAGATTAG 861 0.4204 MGSEREQDEENSNCFRRGFLGFKRNQVIDCSEMVDSDSEDLFEINLKESLVLETIREDCESTVFSLDIHNCNNDDDDDDDVVYVAVGNDDEHSSPSMEALSWALKHAVTPSATVVRLLHVFPQVKLIPSPLGKIPRNHVNEEYADVHLAQERAKRKLLLQKFIDLCVHSKVKVEVMLIEGDNVAKAIMEHVGNLNIRKVVVGISRSNLSRKCESGRKSGIAGKVLKYAQESCDVKIICEGREVIEQMSDNGSSTASQEINEFRGFLPFKHVMSSWVSLFRSIITRD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01967 286 Pfam Universal stress protein family 92 227 IPR006016 -
Vimu7g01967 286 Gene3D HUPs 83 237 IPR014729 -
Vimu7g01967 286 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 40 256 - -
Vimu7g01967 286 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 92 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01967 Vimu-Chr7 17758693 17759931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01967 93 261 U-box Gene Family AT4G25160 30.233 4.75e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01967 - - vun:114175946 414.846