Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01958 ATGTCTCTGCATTATCTTATTAGAGAGAGTAAAATGATGTCTCCAAAGCATTCAGTTTTGCTCTTACTGTCCTTCATTCTCTTATCTCTTTTCCATGCACCTGCTTTTGCAACAAAAAAGTCTTACATAGTCTACATGGGATCACATGAGCATGGTGAAGGAGCCACGGACGCTGATTTTGATCGAGTTACGCAAGCTCATCACGAGTTCCTTCAATCCTATGTTGGAAGCTTTGAGAAAGCAAAAGAGGCAATGATATACTCTTACACAAGGCACATCAATGGTTTTGCTGCCATGCTGGAAGAGGAAGAAGCTGCTGACATTGCAGAACATTCTGAGGTTGTGTCAGTTTTCTTAAACAAAAGAAGAAAACTGTACACTACTCATTCATGGGAATTCATGGACATGACAAGGGGTGGGGTAGTTCCCTCGGAGTCAGTGTTAAGAAAAGCCAGATATGGTGAAGACAGTATTATTGCGCATCTTGACACTGGTGTATGGCCAGAATCTCCAAGCTTTGGCGACGAGGGGATGGGACCCATACCATCACGGTGGAAAGGAATTTGTCAACATGATATGACCGGATTCCGTTGTAACAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTTGCCGATGCAGGAAACGAAGCAAAATTTAACAACACGGTACGAGACTACGATGGTCATGGATCTCACACACTGTCAACAATAGGAGGAAACTTTGTTCCTGGGGCCAGCGTGTTTGGGTATGGAAATGGAACTGCCCAAGGTGGCTCTCCTAAGGCCCGGGTTGCTTCTTACAAGGTGTGCTGGGGAGACGGTTGCGCTGAGGCCGATATCGTGGCAGGCTTAGACATGGCCATACATGATGGGGTTGATGTACTCTCCCTTTCTCTTGGATCCGATGCTACGGACTACTTTTACGATGGTTTAGCAATCGGGGCCTTTCATGCTACCATGAAGGGCATTTCTGTCGTATGTGCTGGTGGAAATTCCGGACCATTTCCTGGAAGTATCTCTAATATTGCACCTTGGATACTAACCGTTGGTGCAAGCAACTTGGACAGAGAGTTTCACTCTGTTGTTCATCTCCACAATGGACAACGCTTCAAGGGAGCAAGCCTTGCAAAAGCTATGCCGGAAAATAAGCTTTACCCACTCATCAACGCTGCAGATGCAAAAATGGCCAATGAATCAGTTGAAAACGCTACTCTGTGTCTGAGAGGAACAATTGATCCTAAAAAGGCAAGTGGAAAAATATTGGTTTGCCTTAGAGGTACCAATGCAAGAATGGAAAAGAGTCTGGTTGCTTTGGATGCTGGTGCAGTTGGGATGATTCTTTGTAATGACGAGTCTACTGGCAATGACCTTATTGCTGATCCTCATCTCCTGCCTGCATCACAAGTTATTTATAAAGATGGGCTTGCTATCTATGCCTACATGAATTCAACTGAGACTCCGCTAGGATATATTGAACCACCCGAGACTGACTTGGGGATAAAGCCTTCTCCAATGATGGCAGCTTTCTCCTCAAGAGGGCCCAACACAGTCACGCCAGAGATCCTTAAGCCTGATGTCACCGCTCCTGGTGTAAGCATTATCGCTGCCTACTCAGGTGCTGTTAGCCCAACCGAGTACAAATATGATAATCGCAGGGTTCCTTTTATCACCATGTCTGGAACATCCATGGCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACTCTCTATCCTACTTGGAGTCCAGCAGCTATTAAATCTGCAATAATGACAACTGCTAGGACAAGGGACAACACTGGTAAGGCAATGCTTGATGTGGATGGTGAGAAGGCAAATCCATTTGCCTATGGGTCTGGCCACATCAGACCAAATCGTGCCATGGATCCGGGGTTGGTGTATGACTTAAGCATGAATGATTACCTAAACTTTCTTTGTCTTACTGTCCATAACCAGACTCGGATAATGCCATTCTCTGGTGCTCATTACCGTTGCCCTGAAATAGTAGAAATCCTGGATTTCAACTACCCTACAATAACAATACCAAAACTTTATGGCACAGCTAGTTTGACACGGAGGGTGAAAAATGTTGGGTCACCAGGCACTTACACTGCAAGACTTAGGGTACCAGCAGGTCTTTCCATCTCTGTGGAGCCTCGTGTGTTGAAATTTGACAAAATTGGAGAAGAGAAGAGCTTTAAGATAACAGTGAAAGTAACAATACCGGGTGAGGCTACAGCGTTTGGAGGCATAACTTGGTCAGATGGGAAACATCAAGTCAGGAGCCCAATTGTAGTTGGTGGAGTTAAAGGGTAG 2328 0.4536 MSLHYLIRESKMMSPKHSVLLLLSFILLSLFHAPAFATKKSYIVYMGSHEHGEGATDADFDRVTQAHHEFLQSYVGSFEKAKEAMIYSYTRHINGFAAMLEEEEAADIAEHSEVVSVFLNKRRKLYTTHSWEFMDMTRGGVVPSESVLRKARYGEDSIIAHLDTGVWPESPSFGDEGMGPIPSRWKGICQHDMTGFRCNRKLIGARYFNKGYLADAGNEAKFNNTVRDYDGHGSHTLSTIGGNFVPGASVFGYGNGTAQGGSPKARVASYKVCWGDGCAEADIVAGLDMAIHDGVDVLSLSLGSDATDYFYDGLAIGAFHATMKGISVVCAGGNSGPFPGSISNIAPWILTVGASNLDREFHSVVHLHNGQRFKGASLAKAMPENKLYPLINAADAKMANESVENATLCLRGTIDPKKASGKILVCLRGTNARMEKSLVALDAGAVGMILCNDESTGNDLIADPHLLPASQVIYKDGLAIYAYMNSTETPLGYIEPPETDLGIKPSPMMAAFSSRGPNTVTPEILKPDVTAPGVSIIAAYSGAVSPTEYKYDNRRVPFITMSGTSMACPHVAGVVGLLKTLYPTWSPAAIKSAIMTTARTRDNTGKAMLDVDGEKANPFAYGSGHIRPNRAMDPGLVYDLSMNDYLNFLCLTVHNQTRIMPFSGAHYRCPEIVEILDFNYPTITIPKLYGTASLTRRVKNVGSPGTYTARLRVPAGLSISVEPRVLKFDKIGEEKSFKITVKVTIPGEATAFGGITWSDGKHQVRSPIVVGGVKG 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01958 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 770 IPR045051 -
Vimu7g01958 775 FunFam Subtilisin-like protease SBT1.5 156 379 - -
Vimu7g01958 775 Pfam Peptidase inhibitor I9 41 125 IPR010259 -
Vimu7g01958 775 FunFam subtilisin-like protease SBT1.5 358 501 - -
Vimu7g01958 775 Pfam PA domain 407 480 IPR003137 -
Vimu7g01958 775 CDD PA_subtilisin_like 364 494 - -
Vimu7g01958 775 CDD Peptidases_S8_3 124 598 IPR034197 -
Vimu7g01958 775 SUPERFAMILY PA domain 416 487 IPR046450 -
Vimu7g01958 775 SUPERFAMILY Subtilisin-like 126 636 IPR036852 GO:0004252|GO:0006508
Vimu7g01958 775 FunFam Subtilisin-like protease SBT5.3 31 126 - -
Vimu7g01958 775 Gene3D - 358 501 - -
Vimu7g01958 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 32 126 IPR037045 -
Vimu7g01958 775 ProSiteProfiles Serine proteases, subtilase domain profile. 130 632 - -
Vimu7g01958 775 Pfam Fibronectin type-III domain 677 770 IPR041469 -
Vimu7g01958 775 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Vimu7g01958 775 PRINTS Subtilisin serine protease family (S8) signature 562 578 IPR015500 -
Vimu7g01958 775 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Vimu7g01958 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 563 573 IPR023828 -
Vimu7g01958 775 Gene3D - 649 772 - -
Vimu7g01958 775 Pfam Subtilase family 155 609 IPR000209 GO:0006508|GO:0008236
Vimu7g01958 775 Gene3D Peptidase S8/S53 domain 157 645 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01958 Vimu-Chr7 17698658 17702316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01958 28 770 Subtilisin-like Serine Gene Family AT5G59810 60.186 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01958 - - gmx:100808488 1244.18