Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01949 AGAGAGGGTGGTAGAGAGAGCGAAAGGGAATTGGGTCGATTTGAACTGATGACAGAGGGTAGCAATCCAATATCTCCGGTGGACGGCATGGACGTGACCGGCGGCGGCAAAGAGCAGCAGGCGGCGGGAGTGGGGATTCTCCTTCAAATAATGATGTTGGTTCTGTCTTTCGTGTTAGGTCACATCCTTCGTCGCAAGAGGATTTACGTTCTTCCCGAAGCTAGCGCTTCTCTTCTCATTGGCTTGCTCGTTGGTACACTCGCTAACATTTCTCACACTCAAACTAGTATCAGTCTCTCGCCTAAACCTTTTTTCTCTAATTTTGGAGCTATTGTCACGTTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTGACGGGTGTCTTAGTTTATGTTGGCGGATTGATGTACCTCATGTACAGATTACCTTTTGTTGAGTGTCTAATGTTTGGTGCACTGATATCCGCAACCGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTTGGCACAGACGTCAATCTTTATGCCTTGGTATTTGGAGAATCTGTTTTGAACGATGCAATGGCTATTTCTTTGTACAGGACAATGACAGTGATTAAAAGTCATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTCGGGTCAATGTCTGCTGGTTGGTTTATAAATCTTACATGA 702 0.443 REGGRESERELGRFELMTEGSNPISPVDGMDVTGGGKEQQAAGVGILLQIMMLVLSFVLGHILRRKRIYVLPEASASLLIGLLVGTLANISHTQTSISLSPKPFFSNFGAIVTFAIFGTFLASIVTGVLVYVGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMTVIKSHPSGQNFFMVVVRFLETFVGSMSAGWFINLT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01949 233 Pfam Sodium/hydrogen exchanger family 97 231 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu7g01949 233 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vimu7g01949 233 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vimu7g01949 233 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vimu7g01949 233 PANTHER SODIUM/HYDROGEN EXCHANGER 31 230 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vimu7g01949 233 Gene3D - 144 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01949 Vimu-Chr7 17640027 17644552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01949 32 201 Antiporters AT5G55470 26.633 5.61e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01949 K14724 - gmx:100810105 343.199