Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01946 ATGGCAAGCGTAAGTGTTGCTAAAGAAGAAGATAACAAACTGACGCTCTATTCGTATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGCCTTAAATACGACTACAAGCCCGTCAATCTGTTGAAGGGAGAACAATATAGCCCCGAGTTTCTCCAGCTCAACCCTGTTGGTTGTGTTCCCGTTCTTGTGGATGGCCACGCTGTTCTTTATGATTCTCTCGCCATTATTTTGTATTTGGAAGATAAGTATCCTCACAATCCTCTGCTCCCTCGTGATATTCCTAAGAGAACAATCAATTTCCAGGCTACTAGTGTTGTTTCCTCAACAATACAACCTCTTCATAACTTGAGTTTACTGAACTACATTGGGGAGAAAGTAGGTCCTGACGAAAAACTTCGTTGGGCACAAAGTGTAATTAGAAGAGGCTTTACAGCACTTGAAAAGCTATTGAAAGACCACACAGGAAGATATGCAACCGGGGATGAAGTTTTCCTGAACGAGTTCCCTGTTCTGTCAAGATTGCATGAGACATATACTGCGATGCCCGCATTCCAGGAGGCTCTACCAGAGAACCAGCCAGATGCAGTACACTAG 612 0.4444 MASVSVAKEEDNKLTLYSYWRSSCSFRVRIALNLKGLKYDYKPVNLLKGEQYSPEFLQLNPVGCVPVLVDGHAVLYDSLAIILYLEDKYPHNPLLPRDIPKRTINFQATSVVSSTIQPLHNLSLLNYIGEKVGPDEKLRWAQSVIRRGFTALEKLLKDHTGRYATGDEVFLNEFPVLSRLHETYTAMPAFQEALPENQPDAVH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01946 203 FunFam Glutathione S-transferase Z1 12 96 - -
Vimu7g01946 203 PANTHER MALEYLACETOACETATE ISOMERASE 14 201 - -
Vimu7g01946 203 Gene3D Glutaredoxin 11 96 - -
Vimu7g01946 203 CDD GST_N_Zeta 14 86 IPR034333 -
Vimu7g01946 203 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Vimu7g01946 203 Gene3D - 171 203 - -
Vimu7g01946 203 NCBIfam maleylacetoacetate isomerase 15 201 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vimu7g01946 203 Pfam Glutathione S-transferase, N-terminal domain 16 93 IPR004045 -
Vimu7g01946 203 SFLD Glutathione Transferase (cytosolic) 14 185 IPR040079 -
Vimu7g01946 203 Gene3D - 97 170 - -
Vimu7g01946 203 SUPERFAMILY Thioredoxin-like 10 97 IPR036249 -
Vimu7g01946 203 SUPERFAMILY GST C-terminal domain-like 93 201 IPR036282 -
Vimu7g01946 203 SFLD Main (cytGST) 14 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01946 Vimu-Chr7 17625142 17629542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01946 13 200 Glutathione S-transferase Gene Family AT2G02380 53.846 7.56e-78 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01946 K01800 - gmx:547590 345.51