Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01945 ATGTTTGATGAGGAGGCCACTGAGAATAAGCTGAAGCTGTATTCACACTGGATAAGCTCCTGTTCCTTCCGAGTCCGATTTGCTCTCAACCTCAAAGGACTACCTTACGATTACCAAATAGTCACCACATTTTCTGAGCCCGAGTTTCTCAAGCTCAACCCTATTGGATTTGTCCCTGTGCTGGTGGATGGCGATTCAGTAATTGCTGACTCTTTTGCCATCATTATGTACTTGGAAGATAAGTATCCTCACCCTCCTTTGCTGCCTCATGACATTCTCAAAAGAGCAATCAATTTCCAGGCTGCCACCATCGTTTCCTCATCTATACAACCTTTTCAAAACTATACTGTTGTGAAGTATATAGGGGAAAAAATCGGTCCTGATGAAAAACTTCCTTGGACCCAACGTGTAATAGGAAAAGGCTTTACGGCACTTGAAAAGCTGTTGAAAAACCATGCAGGAAGATATGCAACTGGAGATGAAATTTTCCTGGCAGATTTGTTTTTAGCACCTCAGTTAGATACAGCAATTAGGAGATTCAGCGTTGACATGAAGGAATTCCCTACTCTATCAAGATTACACGAGGCATATAATGAAATCCCAGAATTTCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGTTCATGAGTTGAACCAATAA 663 0.4238 MFDEEATENKLKLYSHWISSCSFRVRFALNLKGLPYDYQIVTTFSEPEFLKLNPIGFVPVLVDGDSVIADSFAIIMYLEDKYPHPPLLPHDILKRAINFQAATIVSSSIQPFQNYTVVKYIGEKIGPDEKLPWTQRVIGKGFTALEKLLKNHAGRYATGDEIFLADLFLAPQLDTAIRRFSVDMKEFPTLSRLHEAYNEIPEFREALPENQPDAVHELNQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01945 220 Gene3D Glutaredoxin 8 90 - -
Vimu7g01945 220 FunFam Maleylacetoacetate isomerase 90 217 - -
Vimu7g01945 220 SUPERFAMILY Thioredoxin-like 9 89 IPR036249 -
Vimu7g01945 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
Vimu7g01945 220 SUPERFAMILY GST C-terminal domain-like 86 214 IPR036282 -
Vimu7g01945 220 SFLD Main (cytGST) 11 197 - -
Vimu7g01945 220 NCBIfam maleylacetoacetate isomerase 12 214 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vimu7g01945 220 FunFam Zeta class glutathione transferase GSTZ1 9 88 - -
Vimu7g01945 220 CDD GST_C_Zeta 94 211 IPR034330 -
Vimu7g01945 220 Gene3D - 91 216 - -
Vimu7g01945 220 SFLD Glutathione Transferase (cytosolic) 11 197 IPR040079 -
Vimu7g01945 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 9 86 IPR004045 -
Vimu7g01945 220 PANTHER MALEYLACETOACETATE ISOMERASE 11 214 - -
Vimu7g01945 220 Pfam Glutathione S-transferase, C-terminal domain 131 204 IPR004046 -
Vimu7g01945 220 Pfam Glutathione S-transferase, N-terminal domain 13 86 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01945 Vimu-Chr7 17619430 17623016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01945 8 213 Glutathione S-transferase Gene Family AT2G02380 59.524 9.59e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01945 K01800 - gmx:100526991 362.844