Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01913 ATGAACATGGTATCAGTTTCAGCGGTGTGCAAGGCGGTGGCGAGTATCAACCCGGGACTGACGATGTCTCCGCTGTCGCTGTTCAGGCAGCGCAACAAGGAAAAGGTTGTGGTCATAATGGGAGCGACGGGGACAGGAAAGTCAAAGCTTGGCATAGACCTTGCCACCCACTTCCCACCAGCGGAGATAGTCAACTCCGACAAAATGCAAGTGTACGAAGGTCTCGACATCACCACCAACAAAGTCACAGAAGACGAGTGCCGAGGGGTCCCACACCATCTCCTAGGCACTGTCCAACCCAACATTGATTTCACTGCCGACGATTTTTGCCACCACGCCACCCTCGCCGTCGGCTCCATTTTGAAACGCGACGGCTTGCCCATCATTGCGGGTGGCTCTAACTCTTTCCTCGATGCCTTGGTCAACCACTGCCCTGACTTTCGCTTGCGCTACCACTGTTTGTTCCTCTGGGTCGACGTCTCCCTCCCGGTCCTCCACTCCTCTCTCTCCGCACGTGTGGATCGCATGATCCGCGCCGGCCAGGTCGACGAGGTTAGACCATTTTTCCAATACCACAACCGCGACTACACCCTGGGCATTCGAAAGGCCATTGGCGTCCCCGAGTTTCATTCCTTTTTCCAGGCCGAAGCCGACGGAGCCGACGAGAGGACCAAGGAGAAGCTCCTCCAGGCTGCCATTGCCTCCATCAAAATCAACAACTGCAACCTCGCCACCCGACAGCTCCACAAGATCCACCGCCTCCACGCCATTTTCAAACGGAACATGCACCGCCTCGAC 798 0.5652 MNMVSVSAVCKAVASINPGLTMSPLSLFRQRNKEKVVVIMGATGTGKSKLGIDLATHFPPAEIVNSDKMQVYEGLDITTNKVTEDECRGVPHHLLGTVQPNIDFTADDFCHHATLAVGSILKRDGLPIIAGGSNSFLDALVNHCPDFRLRYHCLFLWVDVSLPVLHSSLSARVDRMIRAGQVDEVRPFFQYHNRDYTLGIRKAIGVPEFHSFFQAEADGADERTKEKLLQAAIASIKINNCNLATRQLHKIHRLHAIFKRNMHRLD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01913 266 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 262 - -
Vimu7g01913 266 Pfam IPP transferase 70 144 - -
Vimu7g01913 266 Pfam IPP transferase 150 249 - -
Vimu7g01913 266 Gene3D - 33 266 IPR027417 -
Vimu7g01913 266 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 265 IPR039657 -
Vimu7g01913 266 FunFam Adenylate isopentenyltransferase 5, chloroplastic 162 262 - -
Vimu7g01913 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 190 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01913 Vimu-Chr7 17347082 17348539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01913 150 266 C2H2 Transcription Factor Family AT2G27760 29.371 7.33e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01913 7 17347082 17348539 Vimu2g01040 2 6722788 6723774 PCT