Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01838 CAGAATAGCAGCCTCCCCAAGGTTGTCCACACTTCAAACACTGGAAACCCCTCCCCATTGAACAATGACGCTTTTGTTGAAATTGAAACCACGTATGGGTCGGCTCAGGATGATAGTTTCTTCTTTTCCAGCGATTCCAACTCAGGCTATCTGGAATGCATAGTTCCTGATAACTGTTTCAGACCTGCTTCCTCCAGAACCAACAGTTCAAACTCCGGAAAGAGCAATGTGAGCGATCAAAAAGCTAACAAAAACTCGAGTGAGAGTACTAATCATCATCAACAGTACTACTACTCTCAAGAAATGGGAGGAATGGCCTCAAACTTTTCAGAGTTTTGTTATCCAAGTGAAGTGAGTCAAGGATCATGGGATGATCAACAGTCATGGGATTGGAACTGCAGTGAACTTTCAGCCATATTTAAGAACCCATTAAGGGTGGAAAATGGTTGCATGGATGCATTGTACCCGATGAGTGATGATCAGAGTCCTAGTCCAAGTCCAAGTCCAAGCTATGGGGTAATGAATGAGTGTGCTTCTTCTACTACCTGTTCTCCATCACTTCCACCCTTTGGGGACGTAGACTTTGGATACCCACTCTTCTGA 603 0.4428 QNSSLPKVVHTSNTGNPSPLNNDAFVEIETTYGSAQDDSFFFSSDSNSGYLECIVPDNCFRPASSRTNSSNSGKSNVSDQKANKNSSESTNHHQQYYYSQEMGGMASNFSEFCYPSEVSQGSWDDQQSWDWNCSELSAIFKNPLRVENGCMDALYPMSDDQSPSPSPSPSYGVMNECASSTTCSPSLPPFGDVDFGYPLF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01838 200 MobiDBLite consensus disorder prediction 64 91 - -
Vimu7g01838 200 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01838 Vimu-Chr7 16747537 16748380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01838 36 112 AP2-EREBP Transcription Factor Family AT5G18560 32.941 8.00e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01838 - - gmx:100812047 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01838 7 16747537 16748380 Vimu2g00937 2 5894930 5896075 PCT