Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01795 TTGGCGCCCCAAAGACGGTCGCAGCGCCACATGGGTGGTCAGATGCAGCAGAGCAATGCAGCGGCCACTGCTCTGTATGACCACGCCGGCGCCGGATCTCTCCATAATTCGGCGGGGCCGGCTACCGATGCCGGCGACGCCGTCATGGCGCGCTGGTTACAATCCGCCGGCTTGCAGCATCTGGCCTCTCCACTGGCTTCCACTGGTATCGACCAACGCCTCCTTCCCAATCTTCTTATGCAGGGTTATGGAGCGCAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAACGGGGAATCTGGTTCTGAGCCATATACTCCTACTTCCCAAAATTTAAGTGGAGTGACAGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGAGACTTTGGAGCCGGGCTTCTGGATCTTCACGCTATGGATGATACAGAGCTTTTGTCCGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGTGCTAGAGCTTTTGAAGATGACTTCAATCCAATTAGCAGAAAGCAGGAAAGAGGAGAAGCAGATGCTGATGCATCAGTTTTTGTACCTACAAATGAAAAAGATAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGACATTGTAACTGCATATGACAGTGCATATTTGACAGTCCATGAACCAAAACTAAAGGTGGATTTGACAGCTTATGTGGAGAAGCATGAGTTCTGTTTTGATGCTGTTCTTGATGAGAATGTTACCAATGACGAAGTATATCGAGTTACAGTTGAACCAATAATTCCTACAATTTTTGAGAGAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACAATGCAACCGTTGCCGCTCAGAGCTGCTGAAGACCTTGTTAGACAGCTGCATCGACCAGCATATCGAAACCAGAGATTTAAATTGTGGCTTAGCTACTTCGAGATATATGGTGGAAAACTTTTTGATCTTCTAAGTGACAGAAAATTACTGAGTGGCTGTGTTTGTTTTGCTTTGAACAGAAAACTCTGCATGAGAGAAGATGGGCGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTGTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCCAGAAGTACGGGGTCAACTGGTGCAAATGAGGAGTCGTCCAGGTCCCATGCTATCTTGCAACTGGTCGTAAAGAGGCACAATGAGATAAAAGAGAGTAAGCGGAACAATAGTGATGGAAATCAGGCAAAAAGTGGGAAGGTTGTGGGGAAGATATCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAAACAAGGATCGAAGGTGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATCCGTGCTTTGGACAATGATCAGATCCATATTCCTTTTCGGGGAAGCAAACTTACGGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCTGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTCTATCCAAGAGTGGAAATCCTCGGAAGGACCAGGCCCCAAATCCAGTTCCACCAGTCAATAAAGAGGCTTCACCCACATCTTCACTTCTTGCTAGCATGGGTACAGAGGATTTTAACGGTCAGCGTCAAGAGATAAAAGCAACGGACTTGGGTAGAAAAGGTTTAGAAAAGGAAAGTTCTTTGTACAGCTCTTCCACTGATGTTGACAAACAACTATCAAGTTTCTCTTCTAGTTATTCATACAATGGGCGAGAAGATAAAAGCCTGGCTTCTGCTCCAATGGACAGGGAAAGGTTTGAAGTAAAGAATTCTTACGGTGATTCTACAAGTCAAAAGATGAACTCTTATTCCCTAAATGTTACAGATGAGAAAGTGCAAAGGGTGTCTCCTCCACGCAGAAAAGGAACTAAGGAGGAGAAATCCGAAAGATCTATAAATTGGGTAAAAAGGGATTCCAATGGTTCTAATAACACCACAAGCTCCAAGCAGCAGAACACAGGAAATTATAACACGGTTAGCACTGGATCGGGGCAGTCTGAAACAGAATCCTCTTCTGACGTGAATATCAGCGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTCCGTGAAGAAATGAAACTATTGGCAGAAGTGGACCAGCCAGGAAGTCTAATTGACAACTATGTAACTCAGTTGAGTTTTGTGCTTTCTCGCAAAGCAGCTAGCCTGGTGAGTCTTCAAGCTCGGCTCGCAAGGTTCCAACATCGACTAAAAGAACAAGAGATACTAAGTAGAAAAAGAGTACCCCGTTAA 2514 0.4383 MAPQRRSQRHMGGQMQQSNAAATALYDHAGAGSLHNSAGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTSQNLSGVTVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARAFEDDFNPISRKQERGEADADASVFVPTNEKDNNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTAYDSAYLTVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPAYRNQRFKLWLSYFEIYGGKLFDLLSDRKLLSGCVCFALNRKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNSDGNQAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVPPVNKEASPTSSLLASMGTEDFNGQRQEIKATDLGRKGLEKESSLYSSSTDVDKQLSSFSSSYSYNGREDKSLASAPMDRERFEVKNSYGDSTSQKMNSYSLNVTDEKVQRVSPPRRKGTKEEKSERSINWVKRDSNGSNNTTSSKQQNTGNYNTVSTGSGQSETESSSDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01795 837 SMART kinesin_4 213 568 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 MobiDBLite consensus disorder prediction 562 587 - -
Vimu7g01795 837 Gene3D Kinesin motor domain 194 565 IPR036961 -
Vimu7g01795 837 Pfam Kinesin motor domain 221 561 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 MobiDBLite consensus disorder prediction 636 746 - -
Vimu7g01795 837 CDD KISc_KIF2_like 215 560 - -
Vimu7g01795 837 FunFam Kinesin-like protein 194 565 - -
Vimu7g01795 837 ProSiteProfiles Kinesin motor domain profile. 215 562 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 Coils Coil 754 785 - -
Vimu7g01795 837 PANTHER KINESIN-RELATED PROTEIN 6 42 835 IPR027640 GO:0003777|GO:0007018
Vimu7g01795 837 MobiDBLite consensus disorder prediction 665 685 - -
Vimu7g01795 837 MobiDBLite consensus disorder prediction 709 746 - -
Vimu7g01795 837 MobiDBLite consensus disorder prediction 650 664 - -
Vimu7g01795 837 MobiDBLite consensus disorder prediction 687 708 - -
Vimu7g01795 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 562 IPR027417 -
Vimu7g01795 837 Coils Coil 810 830 - -
Vimu7g01795 837 PRINTS Kinesin heavy chain signature 418 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 PRINTS Kinesin heavy chain signature 462 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 PRINTS Kinesin heavy chain signature 512 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 PRINTS Kinesin heavy chain signature 296 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu7g01795 837 ProSitePatterns Kinesin motor domain signature. 461 472 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01795 Vimu-Chr7 16411374 16419442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01795 207 562 Calmodulin-binding Proteins AT5G65930 34.521 9.02e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01795 K10393 - gmx:100778915 1451.42