Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01746 ATGCTCCTCCCAATCCAGTGTTGCTACCTCAGCACCATCGCCGCGCTAACAATCTTCCTCTCCACCACGTCGTTTTCCGACGCCCAATCCTGTAACGGCATCCTCGTTTCTTATGCCTATACCGGCGGCTCGCGGCTGCCGCCGAATGTCTCCAACGCTGCGGAGCAGCCCTACCGGTTCGAGTCGACGTTGACAGTACTCAACAACGGCCTCGATGAACTCAAGTCGTGGAAGGTCTTCGTGGGGTTTGACCACGACGAGTTGTTGGTCTCTGCGTCCAATGCGGTTCTCGCCGACGGCACAACCCTCCCGGCCGCCGTCGGAAACGGCACTGTTTTCGCTGGCTACCCCATGACCGATCTCAAGACTGCCGTCGCCACCGCCGGCGACTTGACCCAGATGCAGGTTCAGATCAACCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGATTCGTATGTCGTGCATCCACCACCCAAGGGAAGAATGCTAGTAGTGTGTGCTGCACTAGAGATCCCAAGTTCAAAACTAACATCACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGTATTATGTATGACGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGCAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTTGATTCTTCTGAATGTCTGTTCGGTAAGCAAGGTACATTCTACAGGGATCTTGACTTTGCCACTGTTTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCTCCTACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCACCATGGACCCTAGCATGTCAGCCTCAAGATTCCAAATGCAGGTTTTCAAGATGCCACCGGCGCTTAACCGATCCCAACTTTCACCGCCGCAGAACTGGAAGATAAGTGGTACACTCAACCCTGACTATAAATGCGGCCCTCCTGTAAGAGTGAGTCCCACGGAAAACCCCGATCCTTCCGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATTACGACAGCCAAGGGAACATCAAGTAAATGCTGTGTATCATTTTCGGCCTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGTCCCCAGAATAGAGAGAGAACATGTAGTACTACTGCTTCAGCTATGTTGCTTCCACCAGAGGCACTTCTTGTTCCTTATGAAAACCGAACCGCCAAGGCCATTGCTTGGGCAAGCCTGAAACATTTTCCAGTGCCAAACCCGATGCCCTGTAGTGATAACTGTGGGGTGAGCATCAACTGGCATTTGCTCACGGACTACAATAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGCGAGACCAATTTTGCAGACTGGTTTGCTGCAGTACAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAATGCAACTCTTGTAGATGGTGTAAACAACACAATTATTATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCTGACGGCGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAGTCAGTGATCTCTTTCACAAAGAAGCTTACTCCTGGAATCAACACGGTTCGTGGAGATGGTTTTCCCACTAAAGTTCTTTTCAATGGAGAGGAATGCTCTCTTCCTTCCGTGCTTCCAACTAGTGGTGGTTCTTGGGATGGTTTTTCATTGGGAACTTCAGTGCTACTATCACTGTTGTCGTTCCTCTTGACGAGATGA 1935 0.4935 MLLPIQCCYLSTIAALTIFLSTTSFSDAQSCNGILVSYAYTGGSRLPPNVSNAAEQPYRFESTLTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVATAGDLTQMQVQINLVGTVFGVAPPSVPMPKSINLANDGFVCRASTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDSSECLFGKQGTFYRDLDFATVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPTMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNDSVIPCKTCACGCPQNRERTCSTTASAMLLPPEALLVPYENRTAKAIAWASLKHFPVPNPMPCSDNCGVSINWHLLTDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNATLVDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINTVRGDGFPTKVLFNGEECSLPSVLPTSGGSWDGFSLGTSVLLSLLSFLLTR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01746 644 PANTHER COBRA-LIKE PROTEIN 7 25 635 - -
Vimu7g01746 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01746 Vimu-Chr7 16109295 16111425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01746 31 618 COBRA Gene Family AT4G16120 69.543 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01746 - - gmx:100803929 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01746 7 16109295 16111425 Vimu7g01746 7 16109295 16111425 ECH
Vimu7g01746 7 16109295 16111425 Vimu10g00138 10 806545 809245 PCT