Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01739 ATGAGAGTTCAGAAAGAAGGAGCAAAAGATGAAGGTGGCTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTTCAACCACGCCGGGTACCTCAAAATTTGATGAACGGTTTATGTCTCTTTCCTTGAAACAAAGAAGAAAAGTTGATGGAAACTTGGCAACGATGCTTCCCTATCTGGTGGACGAAGATGATGAAATTGGAATAGGGGGAAGTATTAGACATAGTGGTGACCATAGCTGTGCTACATCTGTTATAGATTCTGAAGTATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTGGATTCATTGCCGTCTTCTAGTTTTTCTGATCCATATTCTACCCCATATTTTGACAGCCAATGCATTCAAGATGTGCAGTACTGGAGGAAAAATCTCAATCATCTTCATGATCATCAGATTCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGAACCTCTAGGAACTTCATGGAGAAGCCTCTACAGACCCGTAGCAGGCCCATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCCATTCCCCTTACTCACCATAAACTTTTGTCCCCAATTAAGAATCCTGGCTTTGTTCCATCAAATAATGCCACATACATAATGGAAGCTGCAGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAGCACCTCTGGTAACATCATCAGCAGTATCATTGAGGGTCAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGGGACAACTAATTAGTTCATCTTCAGAGACCTCTAGAGTTAGAGATACAAAAGGAAAAAGAGAAACCTCTCTTAGAACTAATCGGCTTTCTGAAACTTCTCATAGGTTGACTGAGTCTAACGATGCCAAATATCTAAAAGGACAATCTTTGAACAAAAGTTGGAATGGAGTTGTGGATACACCTATCAGATCATCTACTCAAGTAGATGAAGATTGTTATTCAAAAAATAAAGGGAAGTCTATATCACTTGCAATCCAAGCAAAAGTGAACGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGCTTAGTGGAGCAGAGAGAGCAATGTGACACTAAAAACTCCCAGAAGCCTATGAAGGCTAATGTTCAAAAAGGTCTGCACATGAAATCCTCTGGTCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTCCAATGGATAAAGACAAACTACCATCAAAGCCACTGGTTTCCAATTCACAAGGTAGAAAAGTTGTCACTGGGGATTCTTCTAGTGGACGACATAGAAGCTCTAGTAATAAATCCGTTGCAAAATCTAAATCTGGGCCCAAAAAACCATCAACGAGTGTTTCAGACAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTATTCATCGACAAATCACAGAAGCCTGTTCAGTCTAATGTAGTTAGTAATAAATACCATGGTGAGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCATGCCCTTGACAAAAAACAATTCTGGTTTTGAGACATCTGGCCTAAATTCCTTGGATCAGCATATTAGAAGAGTGTTGGTTGATACTGAAACTGATAATGCAGGGTCTCCTGTAGGATACAGTGCAGTTGGTGGTGATGCCTTGGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGAACTCTTGTGATGACTCTCTCAAAGCAAGGTCACCCTCCAGCACTGCACCAAAAGTTGCAGGGTCACCCACCCTTAATTCAGTTAACCTCTTTCCAGGGTTGCAACAGAAGAAAGATCAAGACATGATGTCGACTGATAAATTATTCAGTAACCGCACCTGTCTTCCAGAACTATCATCCCAGCATAGGCTTCGGCTTGATAAGATGGAGGAGTGTGAGATGAATCCTATGGAAGCAGGGTTATTCAATTCAGGACAGCCGAGTCCAATATCTGTTCTTGACCCTTCTTTTTCCACTGAAAGCTGTGAATCTCCATTCAGCGCAAATGCTTCCAGTTCAGAAGACCAAAAAAGGAGGAAGCAAGTTGTGGGCTCAGGAAATGGCTATAGAGACTTGTTTGATTCAGCATCAGCTTGGAGCATGCTAAGGAAACAATCAAGTACATGTTCCCAAATGAAGATTGGACAATCAAGCACATGGGAGTTAGAGTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCGCTTGGCAGAGCTCGTGAGATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGATTTGAGAGTGATGGTGGTGAGTGCAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGCTTGGACTTGAGATGCAGGCGTTATGTTGGTGGAGGTTACAAAATGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTGGAAGGAAATTTCAAGTTGGAGAGATATGGGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGCTTGAAGACCAAATATTTGATTCTTTGGTTGATGACTTCGTTGCAGAAATCCTGCAACTGTAA 2772 0.4113 MRVQKEGAKDEGGFFHMFDWTSKSRKKLFSTTPGTSKFDERFMSLSLKQRRKVDGNLATMLPYLVDEDDEIGIGGSIRHSGDHSCATSVIDSEVCGTRAPGVVARLMGLDSLPSSSFSDPYSTPYFDSQCIQDVQYWRKNLNHLHDHQILYSGKLVEKAEGTSRNFMEKPLQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKNPGFVPSNNATYIMEAAARIIEPGRQAATKAKAPLVTSSAVSLRVRDLKEKVEASQKGQLISSSSETSRVRDTKGKRETSLRTNRLSETSHRLTESNDAKYLKGQSLNKSWNGVVDTPIRSSTQVDEDCYSKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQREQCDTKNSQKPMKANVQKGLHMKSSGQDASGVLRQNNQKQNCPMDKDKLPSKPLVSNSQGRKVVTGDSSSGRHRSSSNKSVAKSKSGPKKPSTSVSDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKSQKPVQSNVVSNKYHGEAEEVKKKDMDVVSFTFTMPLTKNNSGFETSGLNSLDQHIRRVLVDTETDNAGSPVGYSAVGGDALGILLDQKLRELTYGIGNSCDDSLKARSPSSTAPKVAGSPTLNSVNLFPGLQQKKDQDMMSTDKLFSNRTCLPELSSQHRLRLDKMEECEMNPMEAGLFNSGQPSPISVLDPSFSTESCESPFSANASSSEDQKRRKQVVGSGNGYRDLFDSASAWSMLRKQSSTCSQMKIGQSSTWELEYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLENRRGRFESDGGECRIRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAKEVWKEISSWRDMGDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAVLEDQIFDSLVDDFVAEILQL 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01739 923 MobiDBLite consensus disorder prediction 356 490 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 275 303 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 696 726 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 380 416 - -
Vimu7g01739 923 Pfam Domain of unknown function (DUF4378) 764 915 IPR025486 -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 696 715 - -
Vimu7g01739 923 Pfam DUF761-associated sequence motif 88 118 IPR032795 -
Vimu7g01739 923 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 919 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 424 477 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 356 370 - -
Vimu7g01739 923 MobiDBLite consensus disorder prediction 260 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01739 Vimu-Chr7 16054862 16058553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01739 6 921 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.319 5.67e-94 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01739 - - gmx:102660038 1361.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01739 7 16054862 16058553 Vimu10g00131 10 761592 767194 PCT