Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01720 ATGATAATGAGCAATGCTGCCAACACACTTATACCAGTGACACTGGAGCTTGGTGGGAAAGATGCATTTATTGTCTGCGAAGATGTAGATCTAGATCATGTCGCACAAATTGCTGTCAGGGCTGTTCTTCAGTCAAGTGGACAGAACTGTGCTGGGGCAGAGCGATTTTATGTCCACAGGGAAATTTATTCTTCTTTTGTCAGTAAAGTCACCAAAATTGTGAAATCTGTTACAGCTGGCCCACCGCTTGTTGGAAAGTATGATATGGGAGCTTTATGCATGCATGAGCATTCTGAAAAGCTTGAGGGCCTATTAAATGATGCTTTAGACAAAGGAGCCGAGATTGTTGCCCGGGGGAGTCTTGGAAATATAGGTGAAGACGCAGTTGATCAATATTTCCCCCCTACTGTGATTGTGAATGTGAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCAATCATGCCAATAATGAAATTCAGCTCTGATGAGGAGGTTGTCAAACTTGCAAATGACTCAAAGTATGGGTTGGGCTGTGCTGTTTTCTCAGGCAATCAGAGTCGTGCGAGAGAGATAGCTTCACAGATACATGCTGGGGTAGCTGCAGTTAATGATTTTGCATCAACATACATGTGCCAGTCCCTTCCATTTGGGGGTGTGAAACACAGTGGATTTGGACGATTTGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTTAAAGCAGTTGTTGAAGACAGATGGTGGCCGTTTGTTAAAACTAAGATACCTAAGCCTATTCAGGTCACTCAGAAACACTTTTTGTCATAA 816 0.435 MIMSNAANTLIPVTLELGGKDAFIVCEDVDLDHVAQIAVRAVLQSSGQNCAGAERFYVHREIYSSFVSKVTKIVKSVTAGPPLVGKYDMGALCMHEHSEKLEGLLNDALDKGAEIVARGSLGNIGEDAVDQYFPPTVIVNVNHSMRLMQEEAFGPIMPIMKFSSDEEVVKLANDSKYGLGCAVFSGNQSRAREIASQIHAGVAAVNDFASTYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQVTQKHFLS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01720 271 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 243 IPR016162 GO:0016491
Vimu7g01720 271 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 245 - -
Vimu7g01720 271 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 15 22 IPR029510 GO:0016491
Vimu7g01720 271 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 43 54 IPR016160 GO:0016491
Vimu7g01720 271 FunFam Aldehyde dehydrogenase 22A1 23 218 - -
Vimu7g01720 271 SUPERFAMILY ALDH-like 2 247 IPR016161 GO:0016491
Vimu7g01720 271 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 23 218 IPR016163 GO:0016620
Vimu7g01720 271 Pfam Aldehyde dehydrogenase family 2 245 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01720 Vimu-Chr7 15865289 15872855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01720 1 263 Aldehyde Dehydrogenase Gene Family AT3G66658 77.567 9.01e-161 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01720 - - gmx:100802990 511.916