Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01718 ATGGTTGACACTTTCAGTGTAGAGAGTAGGCTTCATATAAGAGAGTTTGATGAAGGTAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATTGGTTGCATACTAGGCCTTAGGGTCTCTCCTTCACACAGGTACTTGATTAATGCCACATATAATGCACCCAATCTGAGAAAGGGGATTGGACTGAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCTTGGCCACTGAAAAGAACAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCTACAGCTCACTTTTCATATTTGTGCATCCGATTAGTTTCCCTGCAAAGCAGATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGAAGAACCCTGATGGCCAAAGAGCTTTACCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTGCAGAGAAAGGAAGAGAGTGAAGACATTATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTACAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATCTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGGCCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGATGGGAGAGAGTTTGAAGGACTTCACAGTGGTTATAACGGAGCTAGGGTTTGGTGATCCACTTGTAAACCATATCCCTCAAACAGCTTCCATGTCGTGTATCGATGATATTTGGTACACGAAAAGAATTTCAAGCCACAGCGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1230 0.4285 MVDTFSVESRLHIREFDEGRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRYLINATYNAPNLRKGIGLKLVTSVEEWMLRNGAEYAFLATEKNNDASRNLFTNKCKYVSYSSLFIFVHPISFPAKQISKDIEIEKVNIDQAISLYRRTLMAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTCEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDFTVVITELGFGDPLVNHIPQTASMSCIDDIWYTKRISSHSDEKDDELLIKRQIGNVFVDPRDF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01718 409 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 409 - -
Vimu7g01718 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 159 IPR016181 -
Vimu7g01718 409 Gene3D - 21 175 - -
Vimu7g01718 409 CDD NAT_SF 62 145 - -
Vimu7g01718 409 Pfam Acetyltransferase (GNAT) family 65 162 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01718 Vimu-Chr7 15847983 15849739 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu7g01718 Acetyltransf_1 2.8e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01718 - - gmx:100814448 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01718 7 15847983 15849739 Vimu7g01718 7 15847983 15849739 ECH
Vimu7g01718 7 15847983 15849739 Vimu2g01491 2 10247047 10249261 PCT