Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01705 ATGGTTTTGGTGGAGCATTATGCCTTAAATTTTGGTTCCTTCATGGGATTTCTTGTCTGTGCAGCAACGTCAGCTGAGTCACACGGGCTTGTTACAGCGGAAACAATTGAAAGAGCATTTCGCCAGACGGAAGATGGATACACAGCCCTCGTGTCAAGTTCCTGGAATGCTCGACCTCAAATTGCGAGTGCTGGTACCTGTTGTCTAGTTGGAGTGATATTTCAACAGACACTCTTTGTGGCAAACGTTGGAGATTCCCGTGTTGTACTTGGTAAGAAAGTTGGCAATACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTTGAGGCTGTTAGACAGGAACTTAAAGAATCACACCCTCATGATCCTCAAATTGTGGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGGATTATTCAGGTTTCTAAATCTATAGGTGACGTATATTTGAAACATCAACAATTTAACCGGGAACCACTTAATGCAAAATTCAGACTTCCTGAACCGATGAACATGCCTATCATGAGTGCTAATCCCAGTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAGAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCGAAGAGACTTATCAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATATTCGGATCTGCGTAAGATTGACAAGAAGAGGCACAGTGCTAGACTCGGCACTTTCACTTCGAAGCGCTCTCGATCACTGACATGTATCATTGTAAGCAGTAAGCAGTCTTGTACGAGTTTTTCCCATAACTGA 870 0.4345 MVLVEHYALNFGSFMGFLVCAATSAESHGLVTAETIERAFRQTEDGYTALVSSSWNARPQIASAGTCCLVGVIFQQTLFVANVGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKESHPHDPQIVVLKHGVWRVKGIIQVSKSIGDVYLKHQQFNREPLNAKFRLPEPMNMPIMSANPSILSHPLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKRHSARLGTFTSKRSRSLTCIIVSSKQSCTSFSHN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01705 289 Pfam Protein phosphatase 2C 56 241 IPR001932 -
Vimu7g01705 289 PANTHER PROTEIN PHOSPHATASE 32 277 IPR015655 GO:0004722|GO:0006470
Vimu7g01705 289 ProSiteProfiles PPM-type phosphatase domain profile. 1 279 IPR001932 -
Vimu7g01705 289 SUPERFAMILY PP2C-like 31 236 IPR036457 -
Vimu7g01705 289 CDD PP2Cc 34 242 IPR001932 -
Vimu7g01705 289 Gene3D - 18 264 IPR036457 -
Vimu7g01705 289 SMART PP2C_4 2 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01705 Vimu-Chr7 15763990 15766646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01705 10 224 PP2C-type Phosphatase Gene Family AT3G17090 63.090 1.08e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01705 K01102 - gmx:100811922 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01705 7 15763990 15766646 Vimu7g01705 7 15763990 15766646 ECH
Vimu7g01705 7 15763990 15766646 Vimu2g01470 2 10104460 10112974 PCT