Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01699 ATGATCACAAACCCGCCAACAGCGAGCACGGAGCGGTCACGTGACGCCAAGAGAAGAAAGAAGAAGAAAACACAGGAAAGAGAGGACGAGAAGCAGCCCAGGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGAGTCAACCTCGGCTCCGCGTCGCCAAAAGGCAAAGCCGTGCGCGAAGCCGCCGACAGAGTCCTGGCCGTGACGGCCAAGGGAAGGACGCGCTGGAGCCGAGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCACGAAACACAAGAGACAGAGAAGAGCTCGCGTGAGCGTTCACCGGCTGAAGGCGAAGGGTGGAGCGAGTGTGCAGAGGAAAGTTAGGTTCCTGGGACGGTTGGTTCCCGGCTGCCGGAAAGAACCGTTACCGGTTGTTCTGGAAGAAGCCATCGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAACGCTCTCTTTAACCTTCTCTCCGCCGCTTCTTCTTCTTCTTCTTCCTCGTAA 540 0.5685 MITNPPTASTERSRDAKRRKKKKTQEREDEKQPRWKSQAQQQIYSSKLRQALARVNLGSASPKGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFTKHKRQRRARVSVHRLKAKGGASVQRKVRFLGRLVPGCRKEPLPVVLEEAIDYIPALEMQVRAMNALFNLLSAASSSSSSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01699 179 CDD bHLH_AtIBH1_like 113 165 IPR044549 GO:0006355
Vimu7g01699 179 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 37 172 IPR044660 GO:0006355
Vimu7g01699 179 MobiDBLite consensus disorder prediction 1 41 - -
Vimu7g01699 179 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 124 171 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01699 Vimu-Chr7 15729538 15730107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01699 30 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 53.714 6.53e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01699 - - pvu:PHAVU_003G116200g 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01699 7 15729538 15730107 Vimu2g01467 2 10086262 10086882 PCT