Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01697 ATGGAGGAGAAGAGAGAGAAAGAAGCAAACTCAAAGTCATCATCCACCATGGCAAATTCTGTGGCATTTTCCGACGAGATTCCCAACATGACCATGACCGTGTCCTTCCCTTTCTCCCCTGCTTTCTCCACCATCTTCGACATCATGCCACCTCTTCCTCCACCACCATCTTCATCCTTGCCTCACGATCCAAAAGCTTCAAACTTTCCCTTCATGGACTTGCTGTCTGTCCCTGATTATACCCCTTCCTTATTCGACTGGCCCCAAAACACCGCCGTCACCTCACCACCACCGCCACCAGCCCCCACCCAAATCACCCACGCGCTTCCCTCCCCGGCCAGCTCCAATGTCCCAGACGGAGGCTCCGAGGTCCTCAACACTCCTCCGTCTCCCAACTACTCCTCGATTTCCTCCTCCTCGAATGAGGCCGCAGCGGCCGCCGCCAACAAAGCAACTGGAAATGAAGACGAAGCCGAGGAGGATGAAACGGCAACAGATGCAGCAGGAAAAGGAGAAGACCAAGATCAAGACAAGTCTAAGAATCAGCCGAAACCGAAAAAGAAGCACCAAAAGAAGCCAAGAGAACCAAGATTTGCGTTCAAAACAAAGAGTGAAGTAGATCACCTCGACGATGGCTATAGGTGGCGCAAGTACGGTCAGAAAGCCGTCAAAAACAGCCCTCATCCCAGGAGCTACTATCGTTGCACCACCGCGGCATGCGGCGTCAAGAAGCGCGTGGAGCGTTCCTCGGAGGACCCTACGGTGGTGGTGACAACCTACGAGGGGCAACACACGCACCCTTGTCCTGCCACGTCACGGGCTAGCCTCGGGTTCTTGCACTCCGAACCAAGTGCGTTCGGACCCACCAGTGGACTCTTCATGCTGCAACAACAACAGCACCAACAGTTTCGTCATGACCAAGCACAAGCACAAGCACAAGCACAAGCTCAAGCTCAAGTAGCAATGTTATACAACTCCACAACCACCAGCACCTCTTCTTCATCATCACCTCTGAATGTTGTTAACTCAGCTACTTGCGTAAACGACTATGTCAACACGTCGTCGTTGAGTGGGTTCCTTCAGAGCCAAGAGAATCTGCGAGGTTTTGCGTTATCTAGGGTGGGAGGTCCTCAGGATTTCTTCAATGGGCTTCTTCAGGACATGGTGCCAACGCAGATGATGAGTGAAGAGAGGGGAGATCGTGTCTAG 1209 0.5285 MEEKREKEANSKSSSTMANSVAFSDEIPNMTMTVSFPFSPAFSTIFDIMPPLPPPPSSSLPHDPKASNFPFMDLLSVPDYTPSLFDWPQNTAVTSPPPPPAPTQITHALPSPASSNVPDGGSEVLNTPPSPNYSSISSSSNEAAAAAANKATGNEDEAEEDETATDAAGKGEDQDQDKSKNQPKPKKKHQKKPREPRFAFKTKSEVDHLDDGYRWRKYGQKAVKNSPHPRSYYRCTTAACGVKKRVERSSEDPTVVVTTYEGQHTHPCPATSRASLGFLHSEPSAFGPTSGLFMLQQQQHQQFRHDQAQAQAQAQAQAQVAMLYNSTTTSTSSSSSPLNVVNSATCVNDYVNTSSLSGFLQSQENLRGFALSRVGGPQDFFNGLLQDMVPTQMMSEERGDRV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01697 402 SUPERFAMILY WRKY DNA-binding domain 202 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01697 402 SMART WRKY_cls 209 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01697 402 MobiDBLite consensus disorder prediction 164 182 - -
Vimu7g01697 402 Gene3D WRKY domain 195 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vimu7g01697 402 MobiDBLite consensus disorder prediction 47 61 - -
Vimu7g01697 402 MobiDBLite consensus disorder prediction 107 147 - -
Vimu7g01697 402 MobiDBLite consensus disorder prediction 47 70 - -
Vimu7g01697 402 MobiDBLite consensus disorder prediction 88 205 - -
Vimu7g01697 402 FunFam WRKY transcription factor 57 195 269 - -
Vimu7g01697 402 Pfam WRKY DNA -binding domain 210 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01697 402 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 116 310 IPR044810 GO:0003700
Vimu7g01697 402 ProSiteProfiles WRKY domain profile. 204 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vimu7g01697 402 MobiDBLite consensus disorder prediction 92 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01697 Vimu-Chr7 15695241 15697072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01697 13 396 WRKY Transcription Factor Family AT5G49520 38.060 8.76e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vimu7g01697 WRKY 2.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01697 - - gsj:114394278 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01697 7 15695241 15697072 Vimu7g01697 7 15695241 15697072 ECH
Vimu2g01465 2 10042260 10044143 Vimu7g01697 7 15695241 15697072 PCT