Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01688 ATGCTTAAGCTCACTCCAGCCTTTGCAACCACCCTGAATGATGCCTATGGTGGTGATCCTGGTTGTCCATTAGGGAGTGGCATGTACCGCCACACTTGCCCAGAGGCTGAGGCCATTATCTTCTATTGGGTGGAGCAGGCAGTGTCTGAAGACTCGAGAATGGCAGCCTCACTGCTTAGGCTACATTTCCATGATTGCTTTGGTTGTGATGCTTCAGTCTTGCTGGATGACACACAGGACTTTGTTGGTGAGAAAACTGCCGGTCCAAATTTGAATTCTCTCAGAGGATTTGAAGTGATCGACAAAATCAAATCTGAGCTGGAACTACTCTGTCCACAGACTGTCTCTTGTGCTGACATACTGGCAACTGCTGCAAGAGATTCGGTTCTTCTGTCAGGAGGTCCAATTTGGGAGGTGCAAATGGGAAGGAAAGATAGCATTACTGCCAGTAAGGATGCAGCAAATAATAACATCCCAGGTCCAAACTCCACTGTTGATGTGCTGGTAGCCAAGTTCGAGAATTTAGGCCTTACACTTAAAGACATGGTTGCCCTTTCAGGTGCACACACAATAGGGAAAGCACGCTGCACGACATTCAGCTCTCGATTACAGAGTAGTAGCGACTCAGAAAACATTGATTTCATCGCATCATTGCAACAGTTGTGCTCAGGGTCAGATAATGGTAACATAGTTGCACATCTTGACTTGGCTACACCTGCTACCTTTGATAACCAATACTTCGTTAATCTTCTCTCTGGGGAGGGATTGCTCCCATCAGACCAGACTCTTGTGAATGGAAATGATCAGACGCGACAGATTGTGGAAAACTATGTGGAGAACCCATTAGCTTTCTTTGAAGACTTCAAGCATTCAATGTTGAAAATGGGAAACTTGGGATCACCAAGTAATGGCCAGATTCGTAGGGACTGCCGAACTGTTAACTAG 945 0.4603 MLKLTPAFATTLNDAYGGDPGCPLGSGMYRHTCPEAEAIIFYWVEQAVSEDSRMAASLLRLHFHDCFGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDKIKSELELLCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDSITASKDAANNNIPGPNSTVDVLVAKFENLGLTLKDMVALSGAHTIGKARCTTFSSRLQSSSDSENIDFIASLQQLCSGSDNGNIVAHLDLATPATFDNQYFVNLLSGEGLLPSDQTLVNGNDQTRQIVENYVENPLAFFEDFKHSMLKMGNLGSPSNGQIRRDCRTVN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01688 314 ProSiteProfiles Plant heme peroxidase family profile. 23 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 CDD secretory_peroxidase 24 313 IPR033905 GO:0004601|GO:0042744
Vimu7g01688 314 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 Gene3D Peroxidase, domain 2 159 295 - -
Vimu7g01688 314 Pfam Peroxidase 44 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vimu7g01688 314 SUPERFAMILY Heme-dependent peroxidases 24 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Vimu7g01688 314 FunFam Peroxidase 27 167 - -
Vimu7g01688 314 FunFam Peroxidase 159 295 - -
Vimu7g01688 314 Gene3D - 29 314 - -
Vimu7g01688 314 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu7g01688 314 PANTHER PEROXIDASE 72-RELATED 24 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01688 Vimu-Chr7 15635384 15636761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01688 27 314 Peroxidase AT4G16270 63.851 4.54e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01688 K00430 - gmx:100787637 549.666