LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g01688	ATGCTTAAGCTCACTCCAGCCTTTGCAACCACCCTGAATGATGCCTATGGTGGTGATCCTGGTTGTCCATTAGGGAGTGGCATGTACCGCCACACTTGCCCAGAGGCTGAGGCCATTATCTTCTATTGGGTGGAGCAGGCAGTGTCTGAAGACTCGAGAATGGCAGCCTCACTGCTTAGGCTACATTTCCATGATTGCTTTGGTTGTGATGCTTCAGTCTTGCTGGATGACACACAGGACTTTGTTGGTGAGAAAACTGCCGGTCCAAATTTGAATTCTCTCAGAGGATTTGAAGTGATCGACAAAATCAAATCTGAGCTGGAACTACTCTGTCCACAGACTGTCTCTTGTGCTGACATACTGGCAACTGCTGCAAGAGATTCGGTTCTTCTGTCAGGAGGTCCAATTTGGGAGGTGCAAATGGGAAGGAAAGATAGCATTACTGCCAGTAAGGATGCAGCAAATAATAACATCCCAGGTCCAAACTCCACTGTTGATGTGCTGGTAGCCAAGTTCGAGAATTTAGGCCTTACACTTAAAGACATGGTTGCCCTTTCAGGTGCACACACAATAGGGAAAGCACGCTGCACGACATTCAGCTCTCGATTACAGAGTAGTAGCGACTCAGAAAACATTGATTTCATCGCATCATTGCAACAGTTGTGCTCAGGGTCAGATAATGGTAACATAGTTGCACATCTTGACTTGGCTACACCTGCTACCTTTGATAACCAATACTTCGTTAATCTTCTCTCTGGGGAGGGATTGCTCCCATCAGACCAGACTCTTGTGAATGGAAATGATCAGACGCGACAGATTGTGGAAAACTATGTGGAGAACCCATTAGCTTTCTTTGAAGACTTCAAGCATTCAATGTTGAAAATGGGAAACTTGGGATCACCAAGTAATGGCCAGATTCGTAGGGACTGCCGAACTGTTAACTAG	945	0.4603	MLKLTPAFATTLNDAYGGDPGCPLGSGMYRHTCPEAEAIIFYWVEQAVSEDSRMAASLLRLHFHDCFGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDKIKSELELLCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDSITASKDAANNNIPGPNSTVDVLVAKFENLGLTLKDMVALSGAHTIGKARCTTFSSRLQSSSDSENIDFIASLQQLCSGSDNGNIVAHLDLATPATFDNQYFVNLLSGEGLLPSDQTLVNGNDQTRQIVENYVENPLAFFEDFKHSMLKMGNLGSPSNGQIRRDCRTVN	314

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g01688	314	ProSiteProfiles	Plant heme peroxidase family profile.	23	314	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	CDD	secretory_peroxidase	24	313	IPR033905	GO:0004601\|GO:0042744
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	33	52	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	57	77	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	114	124	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	249	266	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	180	192	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	233	248	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	95	108	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu7g01688	314	PRINTS	Plant peroxidase signature	133	148	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 25 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g01688	Vimu-Chr7	15635384	15636761	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g01688	27	314	Peroxidase	AT4G16270	63.851	4.54e-138	393

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g01688	K00430		-	gmx:100787637	549.666

Showing 1 to 1 of 1 entries