Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01653 ATGGCTGAGACCACAAAATACATTCCCAACTCACAATTAGAGCTTGAAGAGATATTGCAAGAAGCATCACATCGTTGGCTTCGACCTGTTGAAATATGTGAGATACTTCGGAACTATAAGAAGTTTAAGTTAACACCAGATCCACCTATTAGGCCTCCAGCTGGATCAGTATTCCTGTTCAATAGAAAAGCACTTCGTTATTTTCGCAAAGATGGTCACAGGTGGAGGAAGAAAAAAGGTGGGAAGACTGTAAGAGAAGCTCATGAAAAGTTGAAGGTTGGTAGTGTGGATGTCTTGCATTGCTACTATGCCCATGGAGAGGATAATGAAAACTTCCAACGAAGAAGTTTTTGGATGCTTGACCAGCAGTTAGAGCACGTTGTCCTTGTTCATTATCGTGAAATTAAAGAGGGCTGCAAATTTGGCATCTCTCCTTTTCCAGTAGTTCCAGTAACCCTGGTTGGTAGCTCTCAAAATAGTTCAGTGCTTTCCTCTACCAGAACAAACACACCAATATCTATAGTTCAAACATCTTTTACATCAAGTGCAAATAAAGTGGATCAGAATGGACACTCTGCGGAGTATGAGGATGTCAATTCAAAATATGGTCCTCAATCCTCCTCTCATGCTCAGCCTATCAGCAATTCCGTAATTCACAGTGCACCTTCGTTTACACATGAAGTTGCTGGGTTTTCTGAGTTGGTGAGGAACCCCTTGATTTCAACGTTGTCATCTACTTTTCCTAGTTATTCTCCTGGTACTGTCTTCTCTCAGAGGACGTTAGTTCAGAATTCTAGCAGAAACAAAATTTATATGCACGATGAAAGACATCAGACTGAAGGATCTGTTGAAAGCTCGGAAGCTGACTTCACTGTTCATCTGCTAAACAATGCTAAGATAGATGCTGTTAACAGAATGCAAGATGGTGTAATTTTCAGAGATAGCCACATGTACATCCAACAAGTTGAAGAAAATTTATTGACTGTTGGTCAGGTGCAAAACGAGGATGGTCTAGATATATTCTATACTCAATTATATGATCGTAATGATCATCCAATTGTTGCAACTACCAAAGCGCTAGTTGAACAGAAACTTAAAGATGGGGAATCAGAACAGGCTGAATCTGGGGAAATCAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAGATTGGTGGAGACTGTGAAAATTCCTTGATGGCTTCTGATTCTAGTAATTATTGGAGTACACTTGGTGCTCATATTGAGGATAAGGAGGTATCTAGTTTACAACACATACAGTTGGATATGGATTCATTAGGCCCTTGTCTTTCCCAAGAGCAACTATTTAGTATCCATGACTTTTCTCCAGAGTGGGCATATACTGGGGTTAGAACAAAGGTTTTAATAGTTGGCACATTTATCGGAAGTAAAAAGCCCTCTAGTGAAACCAAATGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGCTTTAGCAGGTAATGTGATACAGTGTCAGACTCCTTTGCACTCATCTGGCCGTGTACCATTCTATGTTACCTGCAGTAATAGGTTAGCTTGCAGTGAGGTCAGGGAATTTCAATTTGATGAACATCCAACCAAAATTTTTGGTCCTTTGGTTATTAAAATCTCACCAGAAGTTGAGGTCCGACTTCAAATACGACTTCTTAAACTAGTAGACTTGGGACCTGACAATAATTTGTTGAAGTGCTCTGTTTCTGGTTGTGAAAAATGTAAACTCAAGGGAATAATGTATTCCGTGAGAGGTGATAGTGGAGTATTTAAAGAAACTTTCCAGATTGATGGAATCGATCATATAAACCCAAGAGATGTACTATTTCAGAGATTAATGAGAGACAAGCTTTATGAGTGGTTGATATACAAGGTTCATGAAGGAGGAAAAGGATTACATGTGTTGGATGCCGGGGGCCAAGGAGTAATACATTTAGCAGCTGCACTTGGTTATGTGTGGGCTATGGCCCCATCGGTTGCTGCTGGTATCAGTCCTAACTTCAGAGATAATCGTGGAAGAACAGGACTTCATTGGGCTTCGTATTTTGGGAGAGAAGAAACTGTTATTGCTCTTGTCAAATTAGGCGCAGCACCAGGTGCTGTTGAGGATCCAACGTCAGCACTTCCTCCAGGTCAAACAGCTGCTGATTTAGCTTCAAGTAGAGGACATAAAGGCATTGCTGGGTATTTGGCGGAGGCGGATCTGATTAATCGATTATCTATACTGACTGTCAAGGAAAATGAGACTGGTAACATTGCCACAACCATAGCAACTGACAGTGCTTTTCAGTCTGCTGAAGATGATTCGTCTAATTTGACAATGGATGAGCAACACTATGTCAAAGAGTCCCTTGCTGTGTTTCGAAAATCAGCTCATGCAGCTGCTTCAATCCTAGCAGCCTTTAGAGCAAGGTCATTCTGTCAGAGACAATTAGCCAAAAGTGGAAGTGATATCTCAGACTCAGTACTTGACATAGTTGCCGATTCTTTGAGCAAGGTACAGAACATGTATCACTTTGAGGATTATTTACATTTTGCAGCCTTAAAGATTCAAAAGAGATATCGTGGATGGAAAGGAAGAAAGGACTTTTTGAAGATACGCAACCGCATTGTAAAAATCCAGGCTCGTATCAGAGGACACCAAGTTCAAAAGCAATACAAAAAAGTTGTGTGGTCTGTTAGCATTGTGGAAAAAGCAATACTTCGTTGGAGACGGAAAGGAGCTGGTCTGCGAGGATTCCGGGGAGGGCAGCCGGTTGGCATTGATGAATATGACTTTCTTAGTGATGGGAGGAGACAGAAATCAGATGATGTAAAGAAAGCTCTCGATAGAGTCAAGTCCATGGTTCGTAACCCAGATGCAAGGGATCAGTATATGAGGCTCATCATGAAATACCAGAATTTTAAGATTGATGATAGCGGAAGCATTCAATCACGTGTTGATTAG 2967 0.4095 MAETTKYIPNSQLELEEILQEASHRWLRPVEICEILRNYKKFKLTPDPPIRPPAGSVFLFNRKALRYFRKDGHRWRKKKGGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRSFWMLDQQLEHVVLVHYREIKEGCKFGISPFPVVPVTLVGSSQNSSVLSSTRTNTPISIVQTSFTSSANKVDQNGHSAEYEDVNSKYGPQSSSHAQPISNSVIHSAPSFTHEVAGFSELVRNPLISTLSSTFPSYSPGTVFSQRTLVQNSSRNKIYMHDERHQTEGSVESSEADFTVHLLNNAKIDAVNRMQDGVIFRDSHMYIQQVEENLLTVGQVQNEDGLDIFYTQLYDRNDHPIVATTKALVEQKLKDGESEQAESGEIKKLDSFGRWMDKEIGGDCENSLMASDSSNYWSTLGAHIEDKEVSSLQHIQLDMDSLGPCLSQEQLFSIHDFSPEWAYTGVRTKVLIVGTFIGSKKPSSETKWGCMFGEIEVSAEALAGNVIQCQTPLHSSGRVPFYVTCSNRLACSEVREFQFDEHPTKIFGPLVIKISPEVEVRLQIRLLKLVDLGPDNNLLKCSVSGCEKCKLKGIMYSVRGDSGVFKETFQIDGIDHINPRDVLFQRLMRDKLYEWLIYKVHEGGKGLHVLDAGGQGVIHLAAALGYVWAMAPSVAAGISPNFRDNRGRTGLHWASYFGREETVIALVKLGAAPGAVEDPTSALPPGQTAADLASSRGHKGIAGYLAEADLINRLSILTVKENETGNIATTIATDSAFQSAEDDSSNLTMDEQHYVKESLAVFRKSAHAAASILAAFRARSFCQRQLAKSGSDISDSVLDIVADSLSKVQNMYHFEDYLHFAALKIQKRYRGWKGRKDFLKIRNRIVKIQARIRGHQVQKQYKKVVWSVSIVEKAILRWRRKGAGLRGFRGGQPVGIDEYDFLSDGRRQKSDDVKKALDRVKSMVRNPDARDQYMRLIMKYQNFKIDDSGSIQSRVD 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01653 988 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Vimu7g01653 988 FunFam Calmodulin-binding transcription activator 2 439 536 - -
Vimu7g01653 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 845 900 IPR027417 -
Vimu7g01653 988 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Vimu7g01653 988 SUPERFAMILY E set domains 446 531 IPR014756 -
Vimu7g01653 988 Gene3D - 620 745 IPR036770 -
Vimu7g01653 988 Gene3D Immunoglobulins 439 537 IPR013783 -
Vimu7g01653 988 SMART CG_1_2 18 136 IPR005559 GO:0003677
Vimu7g01653 988 SMART iq_5 872 894 IPR000048 GO:0005515
Vimu7g01653 988 SMART iq_5 849 871 IPR000048 GO:0005515
Vimu7g01653 988 FunFam Calmodulin-binding transcription activator 2 849 897 - -
Vimu7g01653 988 Gene3D - 848 897 - -
Vimu7g01653 988 ProSiteProfiles IQ motif profile. 850 879 IPR000048 GO:0005515
Vimu7g01653 988 SUPERFAMILY Ankyrin repeat 632 740 IPR036770 -
Vimu7g01653 988 Pfam IQ calmodulin-binding motif 876 894 IPR000048 GO:0005515
Vimu7g01653 988 Pfam IQ calmodulin-binding motif 853 870 IPR000048 GO:0005515
Vimu7g01653 988 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 973 - -
Vimu7g01653 988 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Vimu7g01653 988 ProSiteProfiles Ankyrin repeat profile. 678 710 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01653 Vimu-Chr7 15327363 15334178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01653 59 969 CAMTA Transcription Factor Family AT2G22300 37.902 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Vimu7g01653 CG-1 7.6e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01653 K21596 - gmx:100818336 1620.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01653 7 15327363 15334178 Vimu7g01653 7 15327363 15334178 ECH