Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01645 ATGGAAGAAGAAGGAGAAGGAGAGATGACCATTAGAAAAGGCTCTATGAGACATAGAGATCCTGAGAAATTTGTTGAAGAAGTCCACGAAACAATTGAACTTGACAATGTAAAGGATTGCTTAGTCGGCATACCTGGCCAAAGTGGCTTATCTACAGAGCAACGCAAAAGACTAACCATTGCAGTGGAGCTTGTTTCTAATCCATCAATAATATTTATGGATGAACCTACATCTGGTTTGGATGCTCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGTCACCGGCAGAACCACTGTTTGCACTATACATCAACCAAAGTGCATTCAGTAA 342 0.4152 MEEEGEGEMTIRKGSMRHRDPEKFVEEVHETIELDNVKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVVTGRTTVCTIHQPKCIQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01645 113 MobiDBLite consensus disorder prediction 1 21 - -
Vimu7g01645 113 Pfam ABC transporter 20 78 IPR003439 GO:0005524
Vimu7g01645 113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 110 IPR027417 -
Vimu7g01645 113 Gene3D - 4 113 IPR027417 -
Vimu7g01645 113 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 20 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01645 Vimu-Chr7 15295349 15297160 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01645 21 113 Calmodulin-binding Proteins AT2G36910 29.412 4.72e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01645 K08711 - gmx:100819411 155.221