Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01627 ATGACGATTTTCAAAGGAGATATTCGCATACCAAAATGGCTATCACCAGGTGCACAAGACTTGATAAAGAGGATTCTTGATCCAAATCCTGAAAAACGGATAACAATGGCTGGGATCAAAGAAGATCCGTGGTTTAAGAAGGGTTATGTTGCAGCAAATGCTGAAGATGAGGATGTATATGTTGACAATGAAGCATTTTCCATGCATGAAGCAGAACAGAGGAATTCAGGATCATCACCAGCCATTATCAATGCATTTCAGTTGATAGGGATGTCTTCGTGCCTAGACCTCTCTGGCTTCTTTGAGAAAGAGGTGAGCATGAAATTCAGGATCACCAAGTGCATTTTAATTTCTACTGATACAGTTTGTGCATAG 375 0.4027 MTIFKGDIRIPKWLSPGAQDLIKRILDPNPEKRITMAGIKEDPWFKKGYVAANAEDEDVYVDNEAFSMHEAEQRNSGSSPAIINAFQLIGMSSCLDLSGFFEKEVSMKFRITKCILISTDTVCA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01627 124 ProSiteProfiles NAF domain profile. 78 102 IPR018451 GO:0007165
Vimu7g01627 124 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 3 111 - -
Vimu7g01627 124 Gene3D Transferase(Phosphotransferase) domain 1 1 72 - -
Vimu7g01627 124 Pfam NAF domain 80 109 IPR004041 GO:0007165
Vimu7g01627 124 SUPERFAMILY Protein kinase-like (PK-like) 5 48 IPR011009 -
Vimu7g01627 124 Gene3D Kinase associated domain 1, KA1 77 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01627 Vimu-Chr7 15188818 15190739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01627 3 104 CBL-interacting serine-threonine protein kinases AT1G48260 59.615 8.57e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01627 K07198 - gmx:100777468 178.333