Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01626 ATGATTGCATCCGAAGGTAAACGTTCAGAAAGTGAATGCAGAAAGCTGTTCCAACAGTTGATTGATGGGGTGAGCTACTGCCACACTAAAGGTGTCTTTCACAGGGATCTCAAGGTTCTTTTTCTTCCTTTTCAAGCTCAAATTGTACCATATAGTTCTCTTTGGTCTTGCCTTTTTCACACAAATGCTGCTATGTCCTTGCAGCTTGAGAATGTACTGGTGGATAACAAAGGAAACTTGAAAATAACTGATTTTGGTCTTAGTGCTTCACCCCAGCATCTCAGGGTAAGATGTTATTATGCTTTCAATTTCAACCACTTTGGGTAA 327 0.4006 MIASEGKRSESECRKLFQQLIDGVSYCHTKGVFHRDLKVLFLPFQAQIVPYSSLWSCLFHTNAAMSLQLENVLVDNKGNLKITDFGLSASPQHLRVRCYYAFNFNHFG 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01626 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu7g01626 108 SUPERFAMILY Protein kinase-like (PK-like) 3 92 IPR011009 -
Vimu7g01626 108 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 90 - -
Vimu7g01626 108 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01626 Vimu-Chr7 15188284 15188699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01626 2 95 CBL-interacting serine-threonine protein kinases AT3G17510 51.064 7.00e-24 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vimu7g01626 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01626 K07198 - gmx:100777468 107.071