Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01588 ATGAGCCAAAGAAGCAAGATTTGTGGAGGAATGAAGCTGCTGAAGCAGAGGATGTTTTTGTTTGTGGGGTTGGCGATATTGAAATGGGTAGAAGGCATGGAGGATACTAATGTGACAGATATAGATATGCTATATGTCAACGGAAGAGGTTTCTACAGACCTTTGATGGTTGGGATTACACTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCACTTCCATCGGGGATATGGTTCAGGATCAAACAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAAAAATTGTCTTTACAGTAAGAAAACACGTCATGGTTCTTCATTCTTTATGGAAAAACAAATACCATTTATTGGGATATTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAAATCCGTTATTGTGATGGGGCATCATTTAGTGGGGACAGTCAAAATGCAGGAGCAGGATTATATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATCTAATGTCAAAAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGAACCACAAGAGTAAAATGCCTGAGTGATGCTGGATTGTTCCTTGATTCGAGACAAAATAAACATCTTGAGTTGTATTGTTGCAGTGTTGATGTGTCTGGCCGTCGCAGCTTGAGGAATTTGTTTGGAAGTGTGGTCACCTTACAGGGAGTGCGAAACAGCCTTCCAAGAAGTTGCACCAGTCGCCTCAATCCAATTTTGTGCTATTTTCCTCAGCACTTAATTGCCAGTGTTAGGACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTTGCTCCACCGTCTGCTGACTACCGATGGAACTGGTATGAATGCAGAAAAGATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTACAAAAATGGGCTATTTATAAATTCATGTTTCGCACATTGTCAATCAGAAAGACAGGATACGTGGTTTGCTCGTGATTCTCCTCGTATAGGAAACAGAGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTAGTGTCCAGGCTATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTTAAGTGA 1299 0.418 MSQRSKICGGMKLLKQRMFLFVGLAILKWVEGMEDTNVTDIDMLYVNGRGFYRPLMVGITLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSFFMEKQIPFIGILSNKAEENPDFFNWNRIKIRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSRQNKHLELYCCSVDVSGRRSLRNLFGSVVTLQGVRNSLPRSCTSRLNPILCYFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKDYARCSAPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFARDSPRIGNRGIAESVGNWFFDRVSVQAIGCPYPCDKTCHNLVFK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01588 432 Pfam Pectinacetylesterase 55 411 IPR004963 GO:0016787
Vimu7g01588 432 PANTHER NOTUM-RELATED 47 428 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01588 Vimu-Chr7 14921498 14925662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01588 56 432 Carbohydrate Esterase AT1G57590 66.048 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01588 K19882 - gmx:100791571 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01588 7 14921498 14925662 Vimu7g01588 7 14921498 14925662 ECH
Vimu7g01588 7 14921498 14925662 Vimu6g01961 6 17607175 17611020 ECH
Vimu7g01588 7 14921498 14925662 Vimu3g01936 3 34337119 34349455 ECH