Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01582 ATGCACTCCAAAAGCAATGCCTATATATGTTGTTCGTTCCTGTTGAAGTGGCTATACATTTTAATGTTAGCTTGGAATCCTGTTAATATATATATGGGTGGATTAGCTAAGATAAGAAAAGTGGATGTTGTGATCCTGTTGGTGGCGATAGGATTGTGCAGGAATGTTGTTGAATGTAGGAAACATGTGAGCATTAAGAACAGGCTTGGAGCTGGAAAGAATATGAGTTTGCATTGCCAGTCGAAGGACAATGATCTCGGACACCAAAACATAGCAAACGGAGATGAGTTTGGGTGGGACTTCTCAGACAATATTTTCGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTGAGGAATATCATTTTAATGCTTATTCCTTTGGCCGGGACAGAGTACGATGTGATGGTGTCGGATGTTCATGGCTCCTATCTGTTGAAGGCATTTATGGCTTCAATGTACAAACGGCCTTCTGGGAATTCATGTACCAATGGCCAAATTAA 510 0.4118 MHSKSNAYICCSFLLKWLYILMLAWNPVNIYMGGLAKIRKVDVVILLVAIGLCRNVVECRKHVSIKNRLGAGKNMSLHCQSKDNDLGHQNIANGDEFGWDFSDNIFGTTLFFCDVGWEKVEEYHFNAYSFGRDRVRCDGVGCSWLLSVEGIYGFNVQTAFWEFMYQWPN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01582 169 PANTHER - 57 155 IPR010264 -
Vimu7g01582 169 Pfam Plant self-incompatibility protein S1 62 167 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01582 Vimu-Chr7 14888962 14892958 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01582 60 167 Carbohydrate Esterase AT3G16970 32.727 2.59e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01582 - - vra:106767420 257.684