Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01581 ATGGGCACCGGTAATAACATATCATGCCCTGCACCCATGAGGGCAGAGTCCAACGGAGGATTCCAACATGAAAATCCTCTGCATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTACTTTTACTAGATTTCTTGCATTCCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAGATCATTGGAGGAATACTACTTGGGCCATCTGCAATTGGGCGAAACGAGAAGTTTCTGAATGCGGTTTTTCCAGCAAAAAGCATCACAGTTCTTGAAACACTGGCCAACATAGGTCTTTTGTTCTTTTTGTTTCTCGTGGGACATGAGCTTGACATGCGTGCAATTCGACGTACTGGTCACAAGGCCTTAGGTATTGCCCTCTGTGGGATCACTGTGCCTTTTGTTCTTGGGATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAGGTGCTGAGCTATTTCCTTTTCTAGTCTTTATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCTGAGCTTAAACTCCTAACCACCGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCGGGTTCTGATGCATCCCCCTTTGTTCCTCTCTGGGTATTGCTCTGTGGTGCTGTTTTTGTCATCTTTGTTGTCTTTGCCGTTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAACCAGTGAAGGAGGTCTACATATGCACCACATTGACTCTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCACTCTTTGGGGCTTTTGTGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTGCTGGGGTGTTGACTGAAAGGATAGAAGACCTGGTTTCTGGCCTTTTCATGCCACTGTATTTTGTGTCCAGTGGCTTGAAGACTGATGTAGCAACGATTAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAACGCTTGCTTTGGGAAGATTATCGGCACTACTGTTGTTTCATTACTGTTTAAGGTGCCTTCCAGAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAGGGCTTGGTAGTACTCATTGTTCTCAACATTGGGAGGGACCTTAAGGTGCTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCATTGTTCACCACCTTCATCACCACCCCAATAGTCATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGATTGCTAGCTTGCTTCCACAGCACCCACAACATTCCCTCGCTAATCAATCTAATAGAGTGTTCCCGTGGAACTGGAAGGAAAGGAAAGCTTTATGTATACACAATGCATTTGATGGAGCTCTCGGAGCGATCTTCGACAATCACAATGGTTCATATGGCACGCAAGAATGGAATGCCTTTTTGGAACAAAAAGCGGGATGGCAAAGATCAAATGATCATAGCTTTTCAGGATTATGAGAAACTGAGCAGTGTCAGTGTCCGCCCCATGACAGTCATTTCTGGTTTCAATAGCATCCATGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTGGATGGATCGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCACGGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGAACGACCCAAGTTCAAGCTAGTGATGTGTCTTATGAGATAGTGGTACCCTTCTTTGGAGGGCATGATGATCGTGAAGCACTTTGTTATGGAATGAGAATGGCTGAGCACCCGGGAATTTTTCTAAATGTGTATAAGTTTGTAAGTCCACCAGGGACATCATTGGCCTTTGATGGTGAATTGGTTGGGGATTCATCAAAGAAAGATAGGAAAACAATGCATGTGATTGACGATAACGATTATGATGATAAGAAACAGGATGATGAATTGTGGAATGAGTTTTTAAGTGCATGCAACAACAACACCCAAGAGACAATGAAGTATGAGCAAAAGCTAGTGGAAAGCAAAGGAGATATTGAGACAGCATTGAAGGAAATGAATAGATGCAACCTCATATTGGTTGGTAGAATGCCATCAGTGACAGCTTTGGGTAGCATAAGTGATTGTCCAGAGCTTGGACCTGTTGGAAGCTTTGTTGCTTCTTCAGATTTTTCCACCCTTACGTCAGTTATGGTAATTCAGCAATACAATCCCTCAACTGACATTAATTCATCCATTTGTAAGGGAGGAATCTGA 2406 0.4468 MGTGNNISCPAPMRAESNGGFQHENPLHYALPLLILQICLVVTFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPAKSITVLETLANIGLLFFLFLVGHELDMRAIRRTGHKALGIALCGITVPFVLGIGTSIALRATVSKGAELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSDASPFVPLWVLLCGAVFVIFVVFAVRPLLVAMANRSLEGEPVKEVYICTTLTLVLACSFVTDTIGIHSLFGAFVVGTVMPKEGSFAGVLTERIEDLVSGLFMPLYFVSSGLKTDVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLFKVPSREALALGFLMNTKGLVVLIVLNIGRDLKVLNDQAFAICVVMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRDPDTELRLLACFHSTHNIPSLINLIECSRGTGRKGKLYVYTMHLMELSERSSTITMVHMARKNGMPFWNKKRDGKDQMIIAFQDYEKLSSVSVRPMTVISGFNSIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESLGHSFQEMNQLVLCHAPCTVGIFVDRGLGGTTQVQASDVSYEIVVPFFGGHDDREALCYGMRMAEHPGIFLNVYKFVSPPGTSLAFDGELVGDSSKKDRKTMHVIDDNDYDDKKQDDELWNEFLSACNNNTQETMKYEQKLVESKGDIETALKEMNRCNLILVGRMPSVTALGSISDCPELGPVGSFVASSDFSTLTSVMVIQQYNPSTDINSSICKGGI 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01581 801 Gene3D - 33 435 IPR038770 -
Vimu7g01581 801 FunFam Cation/H(+) antiporter 15 33 435 - -
Vimu7g01581 801 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu7g01581 801 PANTHER CATION/H + ANTIPORTER 8 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01581 Vimu-Chr7 14882849 14885755 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01581 8 791 Antiporter Super Family AT3G17630 66.369 0.0 1041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01581 K26731 - gmx:100780382 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01581 7 14882849 14885755 Vimu7g01581 7 14882849 14885755 ECH