Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01579 ATGGGTGGATTAGCTAAGATAAGAAAAGTGGATGTTGTGATCCTGTTGGTGGCGATAGGATTGTGCAGGAATGTTGTTGAATGTAGGAAACATGTGAGCATTAAGAACAGGCTTGGAGCTGGAAAGAATATGAGTTTGCATTGCCAGTCGAAGGACAATGATCTCGGACACCAAAACATAGCAAACGGAGATGAGTTTGGGTGGGACTTCTCAGACAATATTTTCGGAACAACACTGTTTTTCTGTGATGTGGGGTGGGAAAAGGTTGAGGAATATCATTTTAATGCTTATTCCTTTGGCCGGGACAGAGTACGATGTGATGGTGTCGGATGTTCATGGCTCCTATCTGTTGAAGGCATTTATGGCTTCAATGTACAAACGGCCTTCTGGGAATTCATGTACCAATGGCCAAATTAA 417 0.4293 MGGLAKIRKVDVVILLVAIGLCRNVVECRKHVSIKNRLGAGKNMSLHCQSKDNDLGHQNIANGDEFGWDFSDNIFGTTLFFCDVGWEKVEEYHFNAYSFGRDRVRCDGVGCSWLLSVEGIYGFNVQTAFWEFMYQWPN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01579 138 PANTHER - 27 124 IPR010264 -
Vimu7g01579 138 Pfam Plant self-incompatibility protein S1 31 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01579 Vimu-Chr7 14880696 14881112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01579 29 136 Carbohydrate Esterase AT3G16970 32.727 7.49e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01579 - - vra:106767420 257.684