Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01576 ATGGGCACCGGTAATAACATATCATGCCCTGCACCCATGAAGGCCACGTCCAACGGAGGGTTCCAACATGAAAACCCTCTGGATTATGCTCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTACTTTTACTAGATTTCTTGCATTCCTCTTCAGACCCCTCAGACAACCCAGAGTCATTGCTGAAATCATAGGAGGAATACTACTTGGGCCATCTGCAATTGGGCGAAACGAGAAGTTTCTGAATGCGGTTTTTCCAGCAAAAAGCATCACAGTTCTTGACACACTGGCCAACATAGGTCTTTTGTTTTTTTTGTTTCTCGTGGGACATGAGCTTGACATGCGTGCAATTCGACGTACTGGTCACAAGGCCTTAGGCATTGCCCTCTGTGGGATCACTGTGCCTTTTGTTCTTGGGATTGGCACTTCCATTGCTCTTCGAGCCACTGTATCCAAAGGTGCTGAGCTATTTCCTTTTCTAGTCTTTATGGGTGTTGCTCTCTCGATCACCGCCTTCCCTGTCCTTGCGAGGATCCTGGCTGAGCTTAAACTCCTAACCACCGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCCTTTCGGGTTCTGATGCATCCCCCTTTGTTCCTCTCTGGGTATTGCTCTGTGGTGCTGTTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCGTTGCTTGTGGCTATGGCTAACCGTTCCCTGGAGGGTGAACCAGTGAAGGAGGTCTACATATGCATCACATTGACTCTGGTTTTGGCTTGTAGTTTTGTCACTGATACTATTGGAATTCATTCACTCTTTGGGGCTTTTGTGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTGCTGGGGTGTTGACTGAAAGGATAGAAGACCTGGTTTCTGGCCTTTTCATGCCACTGTATTTTGTGTCCAGTGGCTTGAAGACTGATGTAGCAACGATTAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAACGCTTGCTTTGGGAAGATTATTGGCACTACTGTTGTTTCATTACTGTTTAAGGTGCCTTCCAGAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAGGGCTTGGTAGAACTCATTGTTCTCAACATTGGGAGGGACCTTAAGGTGCTGAATGACCAAGCATTTGCCATTTGTGTTGTCATGGCACTGTTCACCACCTTCATCACCACCCCAATAGTCATGGCTGTATATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCCGACACTGAGCTTCGATTGCTAGCTTGCTTCCACAGCACCCGTAACATTCCCTCGCTGATCAATCTAATAGAGTGTTCCCGTGGAACTGGAAGGAAAGGAAAACTTTGTATCTATGCAACGCATTTGATGGAGCTTTCGGAGCGATCTTCGGCAATCACAATGGTTCACAAAGCACACAAAAATGGCATGCCCTTTTGTAACAAGAAGCGGGATGGCAAAGATCAAATGATCATAGCTTTTCAGGCATATGAGAAATTGAGCAGTGTGAGTGTGCGACCGATGACAGTCATTTCTGGTCTCAATAGCATCCATGAGGATATTTGTACTACTGCTCACAGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGTGTGGATGGATCGATGGAGTCACTGGGACATTCATTCCAAGAGATGAATCAACTTGTGCTATGTCATGCTCCTTGCTCTGTGGGAATTTTTGTTGATCGAGGTCTTGGAGGGACGAGCCAAGTCCAAGCCAGTGATGTGTATTATAAGATAGTGGTACCCTTCTTTGGAGGGCGTGATGATCGTGAAGCTCTTTGTTATGGAATGAGAATGGCTGAGCACCCGGGTATTTTTCTCACCGTGCTTAAGTTTGTAACTCCACCAGGGACATCATTGGCCTTCGGTGTTGAGGTGTCATCAAAGAAATATAGGAAAACAATGGATGTGGTTGATGTCAATGATTATGATGATAAAGATGATCAGTTGTGGAGTGAGTTTTTAAGTGCATGCAACAACACCACCCAAGAGACAATGAAGTATGAGCAAAAGCTAGTGGAAAGCAAAGGAGATATTGAGACAGCATTGAAGGAAATGCATAGATGCAACCTCATATTGGTTGGTAGAATGCCACCAGTGGCACCTTTGGGTAGCAAAAGTGACTGTCCAGAGCTTGGACCTGTCGGAAGCTTTCTTGCTTCTTCAGATTTTTCCACTGTCACGTCAGTTATGGTAATTCAGCAATACAATCCCTCAACTGACGTTCATCCCTTGGTGATGGAGGAATTTGATTCCCCAGATATGGCGTGGGATGGGCTTTGGGCTTGGGCTTTGCGAAGGTGGATTAACATTGGGGCGAAATCTAAAACTGAAACGAAATCAAAATCGAAAGGAAGGAGAAGGTCGATGGCAGAGAGTGTAGGTGTAGGTGGGTTGGGTGTTACAGGTTCGACTCTTCCCTCGTTCTCTCTTACAAGATCTCACACTTCCATTCCCAACATCTCCATATTCTTTCGCTCTCAATCTCATTCCCCCGCTTTCCGTTACTTCACGCGTTACAATCCCCACCTCCACGCCGCCGTCACTTCCGACTCCAAGGCCACTTCGCTTGACCTGACTCAACCCGATTTCGATCATACCGGTGGCGGTTCCGACGCTAACGGAAACGGTAACGGCTCTGGTGGCGGCGGAGGAGGCGGAGGAGGAGAAGGAGGTGATAACAGCAAGGGCGAGGAAGGATCGGGCAGTGACAAGAAGAAAATGGCTTTGTTAATGTCCCAGAAATTCACTCTAGCTTATGCTGCACTCGTAGGAGTGGGTGGTGTAATGGGTTTTCTCAAGAGTGGCAGTCAGAAGTCGCTTTTGGCTGGGGGTTTGTCTGCATCACTGCTATATTATGTATATACTGAGCTACCTGGAAGGCCTGTTTTTGCATCATCTGTCGGCCTTGGGATATCTGCTGCACTTCTTGGGGTGATGGGTTCTCGTTTCAAGAAATCAGGGAAGGTTTTTCCAGCAGGTGTTGTGTCACTTGTGTCACTTATAATGACTGGTGGTTACTTGCATGGAATTATGCGTAGTGCCCACTAG 3186 0.4664 MGTGNNISCPAPMKATSNGGFQHENPLDYALPLLILQICLVVTFTRFLAFLFRPLRQPRVIAEIIGGILLGPSAIGRNEKFLNAVFPAKSITVLDTLANIGLLFFLFLVGHELDMRAIRRTGHKALGIALCGITVPFVLGIGTSIALRATVSKGAELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSDASPFVPLWVLLCGAVFVIFVVFAIRPLLVAMANRSLEGEPVKEVYICITLTLVLACSFVTDTIGIHSLFGAFVVGTVMPKEGSFAGVLTERIEDLVSGLFMPLYFVSSGLKTDVATIKGGLSWAMLMLVIFNACFGKIIGTTVVSLLFKVPSREALALGFLMNTKGLVELIVLNIGRDLKVLNDQAFAICVVMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRDPDTELRLLACFHSTRNIPSLINLIECSRGTGRKGKLCIYATHLMELSERSSAITMVHKAHKNGMPFCNKKRDGKDQMIIAFQAYEKLSSVSVRPMTVISGLNSIHEDICTTAHRKRAAMIILPFHKHQRVDGSMESLGHSFQEMNQLVLCHAPCSVGIFVDRGLGGTSQVQASDVYYKIVVPFFGGRDDREALCYGMRMAEHPGIFLTVLKFVTPPGTSLAFGVEVSSKKYRKTMDVVDVNDYDDKDDQLWSEFLSACNNTTQETMKYEQKLVESKGDIETALKEMHRCNLILVGRMPPVAPLGSKSDCPELGPVGSFLASSDFSTVTSVMVIQQYNPSTDVHPLVMEEFDSPDMAWDGLWAWALRRWINIGAKSKTETKSKSKGRRRSMAESVGVGGLGVTGSTLPSFSLTRSHTSIPNISIFFRSQSHSPAFRYFTRYNPHLHAAVTSDSKATSLDLTQPDFDHTGGGSDANGNGNGSGGGGGGGGGEGGDNSKGEEGSGSDKKKMALLMSQKFTLAYAALVGVGGVMGFLKSGSQKSLLAGGLSASLLYYVYTELPGRPVFASSVGLGISAALLGVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSAH 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01576 1061 MobiDBLite consensus disorder prediction 821 842 - -
Vimu7g01576 1061 Gene3D - 496 744 - -
Vimu7g01576 1061 Gene3D - 33 435 IPR038770 -
Vimu7g01576 1061 Pfam Transmembrane proteins 14C 961 1052 IPR005349 GO:0016020
Vimu7g01576 1061 MobiDBLite consensus disorder prediction 902 948 - -
Vimu7g01576 1061 FunFam Cation/H(+) antiporter 15 33 435 - -
Vimu7g01576 1061 PANTHER CATION/H + ANTIPORTER 8 782 - -
Vimu7g01576 1061 Gene3D - 945 1061 IPR044890 -
Vimu7g01576 1061 Pfam Sodium/hydrogen exchanger family 39 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01576 Vimu-Chr7 14849222 14856043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01576 8 797 Antiporter Super Family AT3G17630 68.096 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01576 K26731 - gmx:100780382 1316.6