Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01543 ATGGATGATGGTGGAGGTTCGAAATTGAGTGGGATTAGGCAGATTGTAAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTGACTCTGGGCTCAAAAGATTCAAACCATGATTCTGATGATGTGGGTCGTCCTGGGGGCATTCCACCAATGATAAACAAAAGACTAACAAATCTTTTGTACTGTGACTCTGATGAGGATAGCTGCTACAGTCCTCAACCACCGCATGATGTTCCCAAAGGTTACTTAGCTGTCTATGTTGGGCCTGAGCTTCGGAGGTTTATCATCCCAACAACCTACCTTAGCCACTCTTTGTTCAAGGTTTTGTTGGAAAAAGCTGCAGAGGAGTTTGGCTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAAACCTTCAAATACCTCTTGAACTGCATGGAGAATCACGATCAAAGCTCCGTCGGTCAGTTATAA 459 0.4379 MDDGGGSKLSGIRQIVRLKEMFQKWQTVTLGSKDSNHDSDDVGRPGGIPPMINKRLTNLLYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDQSSVGQL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01543 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 137 IPR003676 GO:0009733
Vimu7g01543 152 Pfam Auxin responsive protein 69 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01543 Vimu-Chr7 14538638 14539096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01543 1 144 Calmodulin-binding Proteins AT3G43120 68.966 9.54e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01543 K14488 - gmx:100795275 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01543 7 14538638 14539096 Vimu7g01543 7 14538638 14539096 ECH