Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01535 ATGTGCCACCATCTTCTACAGAACCATTTAACACTCGCATTCTCCCACCCCTTCTCCTGTTTGTTTTCTTTTCCATATATAACAAACATGAAAACGCAACCAATTTCCACTCTCGCCTTCACGCTCTTCCTCCTCTTGTTGTCTCCACCACGCGCTGCCGCGGCAAGGCCGACACCAGATCCACTTCGTACATCATGCGCGCAGGCCAGGTACCCCGCTCTATGCGTGCAAACCCTCTCCAACCTTTCCAACACCGCCGCCAAGCCCATCGACCTGGCCCAGGCCGCCGTCAGAGCTAGTCTGGCCCGTACGCGCGGTCTCTTCGCCTACCTTGGGGCGCTAAAGGCTGCATCGCAGGGTTTCCGACTGAGGCAGCGAGTTGCGGTGAGTGACTGCGTTCAGCAGATATCCGACTCGGTGAGAGAGTTGAGCAAGACGCTGAACGAGTTGCAGCACCTCCGCGACGAAACCTTCCAGTGGCAGATGAGCAACGTCCAGACCTGGACAAGCGCCGCCCTCACAAACGGCGACACTTGCATCTCCGGCTTTAACGCTGTCGCCGCCGGCGCCGGGAATACCAAGTTGGAGCTCAAGCAAAGAGTCACCGACGTTTCCATGTTCACCAGCAACGCGCTTTACCTCATCAGCCGCCTCGCCGATAGCGTCACGGGGAAGCCTCGCGCCAATTCCGGAAACTGA 699 0.578 MCHHLLQNHLTLAFSHPFSCLFSFPYITNMKTQPISTLAFTLFLLLLSPPRAAAARPTPDPLRTSCAQARYPALCVQTLSNLSNTAAKPIDLAQAAVRASLARTRGLFAYLGALKAASQGFRLRQRVAVSDCVQQISDSVRELSKTLNELQHLRDETFQWQMSNVQTWTSAALTNGDTCISGFNAVAAGAGNTKLELKQRVTDVSMFTSNALYLISRLADSVTGKPRANSGN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01535 232 PANTHER PECTINESTERASE INHIBITOR-LIKE 41 214 - -
Vimu7g01535 232 NCBIfam pectinesterase inhibitor domain 37 218 IPR006501 GO:0004857
Vimu7g01535 232 SMART PMEI_2 57 214 IPR006501 GO:0004857
Vimu7g01535 232 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 220 IPR035513 -
Vimu7g01535 232 Coils Coil 133 156 - -
Vimu7g01535 232 Pfam Plant invertase/pectin methylesterase inhibitor 62 213 IPR006501 GO:0004857
Vimu7g01535 232 CDD PMEI-like_3 64 219 - -
Vimu7g01535 232 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 218 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01535 Vimu-Chr7 14486319 14487422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01535 62 221 Carbohydrate Esterase AT3G14310 29.697 7.78e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01535 - - gmx:100810705 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01535 7 14486319 14487422 Vimu7g01535 7 14486319 14487422 ECH