Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01519 ATGGCGAATCATGGTGATTTCACGTATGATGTTTTTATGAGTTTCAAGGGCGAAAATGGGACTCGCTACTCATTCACCGATCATCTCTACCGAGCTTTGCTCCGTCACGGAATCAACGCCTTCAGAGATGATCAGAGTCTCCGAAGCGGGGACGAAATCCGTCCTTCTCTGCTTCAGGCAATCGAAGATTCCAGAATCTCTTTGGTCGTGCTCTGTCAAAACTATGCATCTTCCTCTTGGTGCCTTGACGAACTGGCCAAGATCCTTCACTGTTACGAAAACAAAGGAAAGCATGTCGTTGCAATTTTTTATTTGGTGCAACCTTCCGATGTACGGTACCAGAAAAACAGTTACGCAATTGCCATGAGTAAACATGAAAGCAGATATGGAAAAGACTCGGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGACCTAACCGGAATACACTACAGGAACCATATGTATGAAACTGAGGTTATTGAGAAGATTGTGAAAGACACCTCGGCTAAACTGCCTCCCATGCCTTTACAAATCAAGCACCTAGTTGGACTTGATTCTCGTTTCGAACGGGTGAAATCTCTAATAGATGTTGAATCAAATGATGAAGTTTGTATACTGGGGATCTATGGGGTTGGCGGAATTGGCAAAACCACATTTGCTGTGGATCTGTATAACAAGATCAGGCATCATTTTGAAGCTGCAAGTTTTCTGGCTAATGTCAGAGAAAAAACAAATAAAAGCATTAAGGGCCTGGAAGATCTCCAAAGGACACTTTTGTCTGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACATAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAACAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCAGGATCATTATAACAACAAGAGATAAGGATGTTCTACATAAGCATGATGTTGAAATTAAAGGATATAAGATGGAGGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGAGCTGCAGAAAACTTTGCTAACATCTCTACCAGTGCAGTAAGATATGCAAAGGGTATTCCGTTGGCATTAAGAGTAATAGGCTCCAATTTGAAGGGTAGAGGTCCTGAAGAATGCGAGACTGAATTACAGAAATATAGAAAGGTTCCAGATTTAGAGATTCAAGGTGTACTGGAAATAAGCTACACAAGCCTATCCAACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTCAAAAGGATACTAGATGCTTGTGATTTCAATCCGGATATAAAAGTATTTGTTAGTAAATGTCTCATAACTGTTGATGAAAACGGTTGCTTGGAAATGCATGATCTAATACAAGACATGGGTAAAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGATTATGGTGTCATAAAGATGTTCATGAAGTACTTAAAGAAAACTCAGGAAGTGATACAGTTGAAGGAATAATGCTTTATCCCCCAAAACAAGAAAAAATAGATTATTGGACTGTGACAGCCTTCAAGAAGATGAAGAACCTCAGAATTTTGATTGTTCGCAATGCTATATTTTCGTCTGGTCCTAGTTATCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTCTTTTCCGCCAGATTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTAAAAAGCCATTTCAGAGATTTGAGGATCTGACATTCATCAATCTTTCCCATTGTCAATTCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGGTATTTACACTTGATAAATGCTATAGACTGACAAGGTTCGATAAATCCATTGGGTTTATGCCTAACCTTGTCTATTTAAGTGCTTCAGAGTGCACTCTGCTCACAAGTTTTGTGCCAACGATGTATTTGCCCTCTCTCGAAGTGCTTTCATTTAACTTTTGCAGAAGACTTGAACACTTCCCTCATGTAATGCAAAAAATGGATAAGCCATTAAAGATATACATGATGAGTACTGCCATTAAAAAGATTCCGGAATCCATTGGTAACCTTACTGGACTTGAGCATATAGACATGTCAGTTTGCAAAGAGCTTAAAAATCTGCCAAGTAGCTTCTTTTTGCTTCCAAAACTTGTCACTTTAAAAGTTGATGAATGTTCTCAACTTGGAGAATCATTTCAAAGGTTCCAAGAGAGCCGCCATTCAGTGGCAAATGGCAGTTCAAATTTAGTGACACTTCATTTTTGTGAGACTAATCCATCATATGAAGATCTTTGTGCCATTCTTGAAACTTTTCCAAAATTAGAAGACTTAAATGTATCACACAACGGATTTGTAGCCCTACCAAACATCAACGGAGGATCTTCTCACTTGAAAAGTCTTAATGTTAGTTTCTGCAGGAATCTTAAGGAAATTCCAGAACTTCCCTTGAGTATTCAGAAAGTAGATGCAAGATACTGTCAGTCCTTAACTTCAGAGGCATCAAGCATGCTATTGTCTAAGGTCTCAGAAGAGATCCGAAGAATACAAGTTGTAATGCCGATGCTGAAAAGAGAAATACCTGAATGGTTTGACTGCATAGGCACTAAAGAGATTCCACATTTCTGGGCTCGCAGAAAGTTTCCTGTTGTTGCTTTAGCATTCGTTTTCCAGGAATCGAAAAAGAAACTGTCTGATCTTGAACATGCTTTCCAGTCAGCTGTAGAATCGTTCACTGGATTTATGAACTGGCACACTGTAAGCCTCCACTTGTTTATTGACGGACAAGAAATATGTGGTAGAGATTACCACTGTTTCAACGTTGGAGAAGATCATGTGTTATTTTGTGATCTCCGAGTCTTGTTCAGGGATGAAGAGTGGCAGGGCCTTGAAGCAAGTCTTGGAGATGATTGGAAGGCCATTCAGGTTCAATACGAATCAGACCTCATTCTGAGTCATTGGGGAGTTAATGTGTACGAGCAAGAAACAAACATGGAAGATATCCAGTTCAAACTTCCCACTCCCAGCTCCACGAAGAACTTAATTCCATCATCACTTTTGGTTCCAAAAGGTTGTCCAAAGCAGAAAATGAAACATATGCTGGAAAGTTTTGATCCACGAGACATGTTTAACAAGAATCTGTCTCTAATAGAGTCAGAAGAAGGTCCAAGCAGGGCTGGAAAAGTACTTTTGAGGACCTGGAGGAATGCTAAGGCTGAGATTACCGAGGAAGCTTCAGTTTCAGTCTACGGTGCAAGTTTAAAGCAAGAACACGAAGAATCTGTTGACGATGTGGTACAGGTTTTAGAGATGATAAAGGAGAATGTACCCAAACATTTTTCTGATTCAAACCCTGAAGAAATGCAATCGTTTGGTGGATTTGTAGAAAGATTATTGAGGGCACGGGTAGAAGTAATGAAGGAAGACGCGTTGGACCTGGGTATGCCTATTCTCCTAGAGTACACTGACGTAGGAGGATCTAAATATCGACGGTTTTGGGGAGTGTTGCAATTAAAAGTGGGAGATCCATTTTACCAAGCAGTGTTGAGGAAGTATATCCAACTTTCATTGGAATTTTCGACAAGCGACAAAGCCGCCTCCAGCTCAGGTTCGTGGTTTGAAAACTTGAGGATAACCATTGTTTTATTGAAATGCTTGGATCCAGCCATGGAGGAAGCTTCGGGCTTTGGCTATGAGGAATCCTTGGAGGAAGGATACTACGATCCTGAATTGGAAGAATTAATGATGAGGATTGAGCAAGATGGTATGGGGTTTAATAAATCTTACGGCAAAATGAAGGCATCTATTGTTCGAACCGATGAATCGGTTTCTCCAAAGTATTTATTTGAGACATTAATCTTCAGAAGACTAATAGCTTTGGGAAAATTGTCAATGTTTGGATCTGCAACTAAGTTCAAGATAACACCGTATGGGAATATAAGGGTTGAAGACGATCCTTTCCGCATTCCGAAGACGTGCTTTTGGAGTTTGATCTTGGATACCAGTAATAGGGAAGATATTAGTGTGTGGTTGGTGGCTTGTCATGCAAATTCTTGTGTCTTGTAA 4197 0.4015 MANHGDFTYDVFMSFKGENGTRYSFTDHLYRALLRHGINAFRDDQSLRSGDEIRPSLLQAIEDSRISLVVLCQNYASSSWCLDELAKILHCYENKGKHVVAIFYLVQPSDVRYQKNSYAIAMSKHESRYGKDSEKVKAWRSALSRVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGLDSRFERVKSLIDVESNDEVCILGIYGVGGIGKTTFAVDLYNKIRHHFEAASFLANVREKTNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGHKRVLLVVDDVDSVKQLEALAGGYDWFGPGSRIIITTRDKDVLHKHDVEIKGYKMEELNYHESLELFCWYAFNRSRAAENFANISTSAVRYAKGIPLALRVIGSNLKGRGPEECETELQKYRKVPDLEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFNPDIKVFVSKCLITVDENGCLEMHDLIQDMGKEIVRKESPSNPGYRSRLWCHKDVHEVLKENSGSDTVEGIMLYPPKQEKIDYWTVTAFKKMKNLRILIVRNAIFSSGPSYLPNSLRLIDWKGYPSKSFPPDFYPHRIVDFKLPHSSLIFKKPFQRFEDLTFINLSHCQFITQIPDLSGAKSLKVFTLDKCYRLTRFDKSIGFMPNLVYLSASECTLLTSFVPTMYLPSLEVLSFNFCRRLEHFPHVMQKMDKPLKIYMMSTAIKKIPESIGNLTGLEHIDMSVCKELKNLPSSFFLLPKLVTLKVDECSQLGESFQRFQESRHSVANGSSNLVTLHFCETNPSYEDLCAILETFPKLEDLNVSHNGFVALPNINGGSSHLKSLNVSFCRNLKEIPELPLSIQKVDARYCQSLTSEASSMLLSKVSEEIRRIQVVMPMLKREIPEWFDCIGTKEIPHFWARRKFPVVALAFVFQESKKKLSDLEHAFQSAVESFTGFMNWHTVSLHLFIDGQEICGRDYHCFNVGEDHVLFCDLRVLFRDEEWQGLEASLGDDWKAIQVQYESDLILSHWGVNVYEQETNMEDIQFKLPTPSSTKNLIPSSLLVPKGCPKQKMKHMLESFDPRDMFNKNLSLIESEEGPSRAGKVLLRTWRNAKAEITEEASVSVYGASLKQEHEESVDDVVQVLEMIKENVPKHFSDSNPEEMQSFGGFVERLLRARVEVMKEDALDLGMPILLEYTDVGGSKYRRFWGVLQLKVGDPFYQAVLRKYIQLSLEFSTSDKAASSSGSWFENLRITIVLLKCLDPAMEEASGFGYEESLEEGYYDPELEELMMRIEQDGMGFNKSYGKMKASIVRTDESVSPKYLFETLIFRRLIALGKLSMFGSATKFKITPYGNIRVEDDPFRIPKTCFWSLILDTSNREDISVWLVACHANSCVL 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01519 1398 PRINTS Disease resistance protein signature 733 749 - -
Vimu7g01519 1398 PRINTS Disease resistance protein signature 381 395 - -
Vimu7g01519 1398 PRINTS Disease resistance protein signature 287 301 - -
Vimu7g01519 1398 PRINTS Disease resistance protein signature 209 224 - -
Vimu7g01519 1398 Gene3D - 346 430 IPR042197 -
Vimu7g01519 1398 Gene3D - 7 174 IPR035897 -
Vimu7g01519 1398 Gene3D - 175 341 IPR027417 -
Vimu7g01519 1398 Gene3D Ribonuclease Inhibitor 718 896 IPR032675 -
Vimu7g01519 1398 Gene3D Ribonuclease Inhibitor 542 717 IPR032675 -
Vimu7g01519 1398 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
Vimu7g01519 1398 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 176 - -
Vimu7g01519 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Vimu7g01519 1398 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 770 IPR044974 GO:0006952
Vimu7g01519 1398 Pfam NB-ARC domain 192 398 IPR002182 GO:0043531
Vimu7g01519 1398 Pfam TIR domain 9 182 IPR000157 GO:0007165
Vimu7g01519 1398 SUPERFAMILY L domain-like 498 882 - -
Vimu7g01519 1398 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Vimu7g01519 1398 SMART till_3 8 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01519 Vimu-Chr7 14354552 14359776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01519 9 783 WRKY Transcription Factor Family AT4G12020 30.605 8.92e-88 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01519 - - vum:124827482 1758.04