Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01500 ATGCATTTTGTTTCTTCTACAATTCACCTTCCATTCTTCCACGATTCTGTTTCTTCCAAATGCCCAAGAACTGCGTCATCTCTCTCCATGGATTCTGATTTCTTGAAGAAAGAAACCTCGCTGCAGCTTTTGACTCTAAAGGCACGTGTCCCCAGACAAAAAACTGTGACTTTCTGCCATCTCAACTTTGGGCGGAAGCAACCTTCGCCGGAAGAATTGGGTCCACATGAAAGCTTGGAGTTTAGGAATTTCATTGCAAGAGAGGCCTTTCTTAATGAAGAGTATTGGATAGCAGCTGCGCTAAGGGCAGAACATAAGATGGAAAATAAATCAAGATATAACCACTATGAGAAGAGGATACACACTATTGAGGAATATGATAAGATAAAGAAGCACTGCAGGGAGCCACAACCCAGTCATAGCTCCACATGCATCATCGCGGTAAAGAAGCAAGTAAAGGATGTAACACGAATAGTCCTACGAAGTGTAGTAGGAACCCTTGATTTGAATATCAGATGTTTGCAGTTTGGGGAGAGCTATCCTAGAGAAAGGGTAAATGCTACCGGTGTTCAAGTCAAGGAAAGATCATCAAGCAGATACGGTTATATTGCAAACGTGTGTGTTGCTAAATCATATCGCCGCAAGGGTATTGCAAGCAACATGTTGTGTTTCGCTGTGAAATATGCAAAATCTAGAGGTGTGAATAGTGTTTATGCGCATGTAAATAGAAATGATGGTCCTGCCTTGGCATTGTTCCAAAAGTTGGGGTTTAAG 774 0.4199 MHFVSSTIHLPFFHDSVSSKCPRTASSLSMDSDFLKKETSLQLLTLKARVPRQKTVTFCHLNFGRKQPSPEELGPHESLEFRNFIAREAFLNEEYWIAAALRAEHKMENKSRYNHYEKRIHTIEEYDKIKKHCREPQPSHSSTCIIAVKKQVKDVTRIVLRSVVGTLDLNIRCLQFGESYPRERVNATGVQVKERSSSRYGYIANVCVAKSYRRKGIASNMLCFAVKYAKSRGVNSVYAHVNRNDGPALALFQKLGFK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01500 258 Gene3D - 82 258 - -
Vimu7g01500 258 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 31 258 - -
Vimu7g01500 258 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 199 258 IPR016181 -
Vimu7g01500 258 CDD NAT_SF 192 240 - -
Vimu7g01500 258 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 199 258 IPR000182 GO:0016747
Vimu7g01500 258 Pfam Acetyltransferase (GNAT) family 196 257 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01500 Vimu-Chr7 14201954 14208496 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu7g01500 Acetyltransf_1 2.1e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01500 - - vra:106766506 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01500 7 14201954 14208496 Vimu7g01500 7 14201954 14208496 ECH
Vimu7g01500 7 14201954 14208496 Vimu10g00463 10 3506603 3508243 PCT