Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01497 ATGGGAACTGTTAGCTGGTTCTTGGCTGCACTATTAACTGTCAACAATCAATATTTAACAAATATTTCGTTGAAGATCAATGTTAAGCTTGGAGGATTGAATTCAATATTACCAAGAAGAGATTTTCTTTCAGTCCTATCTGTTTCTGAAGCTCCTACAATGATTATTGGCATTGATTCCTTTGTGGGCTCCGTAGGAGAAAGTATTCCTTCAAGTGTAGTGGTTATAGTACACAAGGGCTTGGGTATAGGACATAGGGAGGGCTTAGTAGAAGTTAGAGGCTTAGGTCAAAGTAAGGGGTCATTGAAGAATAAGGTACTTGCTGAAACGGGAACTGTTAGCTGGTGCTTGGCTGCACTATTAACTGTCAAGAATGAATATTTCACAAATAGTTCGTTGAAGATCAATGTTAAGCTTGGAGGATTGAATTCAGTATTACCAAGAAGAGATTTTCTTTCAGTCCTATCTATTTCTGAAGCTCCTACAGTGATTATTGGCATTGATTCCTTCAAGTGTAGTAGTTATAGTACACAAGGACAGAGGGAGGGCTTAGTAAAAGTTAGAGGCTTAGGTCAAAGTTCGGTTAGGGTATACGCCTTAGAGTACTAG 609 0.3875 MGTVSWFLAALLTVNNQYLTNISLKINVKLGGLNSILPRRDFLSVLSVSEAPTMIIGIDSFVGSVGESIPSSVVVIVHKGLGIGHREGLVEVRGLGQSKGSLKNKVLAETGTVSWCLAALLTVKNEYFTNSSLKINVKLGGLNSVLPRRDFLSVLSISEAPTVIIGIDSFKCSSYSTQGQREGLVKVRGLGQSSVRVYALEY 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01497 202 SUPERFAMILY Ribonuclease H-like 17 69 IPR012337 -
Vimu7g01497 202 Gene3D - 4 41 - -
Vimu7g01497 202 Gene3D - 94 150 - -
Vimu7g01497 202 Pfam Piwi domain 15 74 IPR003165 GO:0003676
Vimu7g01497 202 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 15 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01497 Vimu-Chr7 14168344 14170628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01497 11 77 Eukaryotic Initiation Factors Gene Family AT5G43810 38.806 8.79e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g01497 K11593 - atri:130806201 65.855